Strain Fitness in Shewanella loihica PV-4 around Shew_2688

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
3,180,671	-				-0.3
3,180,691	-				+0.1
3,180,807	+		Shew_2687	0.23	-1.5
3,181,071	+		Shew_2687	0.56	+0.1
3,181,259	-		Shew_2687	0.79	-0.8
3,181,507	+				-0.5
3,181,829	+		Shew_2688	0.21	+1.0
3,181,994	-		Shew_2688	0.33	-0.8
3,181,994	-		Shew_2688	0.33	-1.1
3,182,248	-		Shew_2688	0.52	-0.5
3,182,334	+		Shew_2688	0.58	-1.0
3,182,402	-		Shew_2688	0.64	-1.7
3,182,529	+		Shew_2688	0.73	-0.0
3,182,537	-		Shew_2688	0.74	-0.1
3,182,537	-		Shew_2688	0.74	+0.0
3,182,542	+		Shew_2688	0.74	-0.3
3,182,550	-		Shew_2688	0.75	-0.4
3,182,592	+		Shew_2688	0.78	-0.6
3,182,661	+		Shew_2688	0.83	-0.3
3,182,745	+		Shew_2688	0.89	+0.8
3,182,761	+				-0.0
3,182,938	+				-1.0
3,183,345	-		Shew_2689	0.28	+0.0
3,183,421	+		Shew_2689	0.37	+0.6
3,183,450	+		Shew_2689	0.40	-0.1
3,183,782	-		Shew_2689	0.79	+0.0
3,183,871	-		Shew_2689	0.90	+0.5