Strain Fitness in Shewanella loihica PV-4 around Shew_2443

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
2,871,280	+		Shew_2442	0.48	+0.2
2,871,280	+		Shew_2442	0.48	-0.1
2,871,400	+		Shew_2442	0.80	+0.7
2,871,400	+		Shew_2442	0.80	-0.0
2,871,400	+		Shew_2442	0.80	+0.9
2,871,400	+		Shew_2442	0.80	-0.4
2,871,697	-				-0.1
2,872,158	+				+0.3
2,872,158	+				+0.5
2,872,378	+		Shew_2443	0.11	-0.5
2,872,625	+		Shew_2443	0.21	-0.1
2,872,831	+		Shew_2443	0.30	+0.1
2,872,864	+		Shew_2443	0.31	-0.6
2,873,552	-		Shew_2443	0.59	+0.0
2,873,675	-		Shew_2443	0.64	-0.1
2,873,688	+		Shew_2443	0.65	-2.0
2,873,704	-		Shew_2443	0.66	-1.5
2,874,153	+		Shew_2443	0.84	-0.6
2,874,153	+		Shew_2443	0.84	-1.5
2,874,544	+				+0.2
2,874,559	+				+1.1
2,874,567	-				-0.2
2,874,679	+		Shew_2444	0.19	-0.4
2,874,687	-		Shew_2444	0.21	+0.2
2,875,269	+		Shew_2445	0.29	+0.0