Strain Fitness in Shewanella loihica PV-4 around Shew_2418

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
2,838,019	+		Shew_2417	0.37	+0.3
2,838,468	+		Shew_2417	0.84	-0.2
2,838,476	-		Shew_2417	0.85	-0.6
2,838,839	-		Shew_2418	0.27	-3.4
2,839,042	-		Shew_2418	0.65	-1.0
2,839,042	-		Shew_2418	0.65	-2.7
2,839,131	+		Shew_2418	0.82	-3.3
2,839,258	+				+0.0
2,839,528	-		Shew_2419	0.28	+1.4
2,839,567	+		Shew_2419	0.36	+1.0
2,839,717	-		Shew_2419	0.68	+1.6
2,839,717	-		Shew_2419	0.68	+0.9
2,839,717	-		Shew_2419	0.68	-0.1
2,839,717	-		Shew_2419	0.68	+1.7
2,839,753	-		Shew_2419	0.75	+1.3
2,839,863	-				+1.2
2,839,935	-				+0.3
2,840,087	+				-0.4
2,840,087	+				-0.1
2,840,095	-				-0.1
2,840,095	-				+1.0
2,840,095	-				+0.5