Strain Fitness in Shewanella loihica PV-4 around Shew_2103

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
2,433,774	+		Shew_2102	0.33	+0.5
2,433,875	+		Shew_2102	0.45	-0.0
2,434,182	+		Shew_2102	0.82	-0.3
2,434,190	-		Shew_2102	0.83	+0.4
2,434,794	+	def	Shew_2103	0.33	+1.0
2,434,800	+	def	Shew_2103	0.34	+0.4
2,434,975	+	def	Shew_2103	0.69	+0.2
2,435,331	+				-0.2
2,435,334	-				+0.3
2,435,339	-				+0.2
2,435,428	+				-0.1
2,435,591	+		Shew_2104	0.17	+0.4
2,435,710	-		Shew_2104	0.24	+0.0
2,436,036	+		Shew_2104	0.42	-1.2
2,436,036	+		Shew_2104	0.42	-0.2
2,436,124	-		Shew_2104	0.48	-0.1