Strain Fitness in Shewanella loihica PV-4 around Shew_1973

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
2,280,572	+		Shew_1972	0.53	-0.5
2,280,621	+		Shew_1972	0.57	+0.1
2,281,099	-				-0.2
2,281,125	+				+0.5
2,281,434	-		Shew_1973	0.20	+2.2
2,281,487	-		Shew_1973	0.25	+0.0
2,281,801	+		Shew_1973	0.55	+0.5
2,281,809	-		Shew_1973	0.55	+1.7
2,281,846	-		Shew_1973	0.59	+0.7
2,281,878	+		Shew_1973	0.62	-0.2
2,281,886	-		Shew_1973	0.63	+0.8
2,281,886	-		Shew_1973	0.63	+0.1
2,282,180	-				+0.4
2,282,383	-				-1.7
2,282,383	-				-0.4
2,282,582	+		Shew_1974	0.26	-0.4
2,282,733	+		Shew_1974	0.52	+0.2
2,282,980	+				-0.3
2,282,980	+				+1.6
2,283,029	+				-0.3