Strain Fitness in Shewanella loihica PV-4 around Shew_1888

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
2,175,134	+		Shew_1887	0.83	-0.6
2,175,715	-				-1.1
2,175,932	-				-0.1
2,176,180	+		Shew_1888	0.19	+1.1
2,176,222	-		Shew_1888	0.20	+0.6
2,176,383	+		Shew_1888	0.26	+0.3
2,176,560	+		Shew_1888	0.32	+0.2
2,176,670	-		Shew_1888	0.36	-0.3
2,176,741	-		Shew_1888	0.39	+0.2
2,176,972	-		Shew_1888	0.47	+2.3
2,177,190	+		Shew_1888	0.54	-0.1
2,177,476	-		Shew_1888	0.65	+0.5
2,177,783	-		Shew_1888	0.75	+0.4
2,178,101	-		Shew_1888	0.87	+0.3
2,178,450	-				-0.2
2,178,508	-				+0.2
2,178,525	-				-0.3
2,178,903	-				+0.9
2,179,282	+		Shew_1889	0.20	+0.4
2,179,335	+		Shew_1889	0.23	+0.4
2,179,363	-		Shew_1889	0.25	-0.0