Strain Fitness in Shewanella loihica PV-4 around Shew_1541

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
1,768,653	+		Shew_1540	0.39	-0.3
1,768,682	+		Shew_1540	0.42	-0.5
1,768,688	+		Shew_1540	0.42	+0.0
1,769,111	-		Shew_1540	0.79	-0.2
1,769,185	+		Shew_1540	0.86	-0.1
1,769,195	+		Shew_1540	0.87	-0.5
1,769,859	+		Shew_1541	0.54	-2.4
1,770,059	+		Shew_1541	0.78	-2.3
1,770,167	-				-3.2
1,770,183	+				-1.2
1,770,313	+				-0.2
1,770,403	+				+1.2
1,770,403	+				-0.5
1,770,905	+		Shew_1542	0.42	+0.0
1,771,010	+		Shew_1542	0.49	-0.3
1,771,072	+		Shew_1542	0.53	-0.6
1,771,080	-		Shew_1542	0.53	+0.6