Strain Fitness in Shewanella loihica PV-4 around Shew_1452

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
1,672,485	+		Shew_1451	0.61	-0.1
1,672,644	-		Shew_1451	0.70	+0.3
1,672,746	-		Shew_1451	0.75	-0.3
1,672,758	+		Shew_1451	0.76	-0.3
1,673,050	-				+0.9
1,673,472	-				+0.8
1,673,663	+		Shew_1452	0.14	-0.4
1,673,778	-		Shew_1452	0.22	-0.5
1,673,922	+		Shew_1452	0.32	-0.2
1,674,090	+		Shew_1452	0.43	+0.1
1,674,339	+		Shew_1452	0.59	+0.0
1,674,366	-		Shew_1452	0.61	-1.3
1,674,366	-		Shew_1452	0.61	-0.5
1,674,795	-		Shew_1452	0.89	-2.8
1,674,945	-				-0.2
1,675,256	-		Shew_1453	0.40	+0.1
1,675,321	-		Shew_1453	0.51	-0.2
1,675,414	-		Shew_1453	0.67	-0.7
1,675,761	-				-0.0