Strain Fitness in Shewanella loihica PV-4 around Shew_1277

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
1,477,162	-		Shew_1276	0.87	-0.5
1,477,170	-		Shew_1276	0.87	+0.4
1,477,299	-				-0.2
1,477,826	+				-0.3
1,477,854	+		Shew_1277	0.11	-0.0
1,477,922	+		Shew_1277	0.16	+0.7
1,478,027	-		Shew_1277	0.23	-1.3
1,478,046	+		Shew_1277	0.25	+0.0
1,478,049	-		Shew_1277	0.25	-1.3
1,478,139	-		Shew_1277	0.31	+0.2
1,478,178	+		Shew_1277	0.34	-0.4
1,478,178	+		Shew_1277	0.34	-0.5
1,478,356	-		Shew_1277	0.46	+0.1
1,478,593	+		Shew_1277	0.62	+0.0
1,478,615	-		Shew_1277	0.64	-0.4
1,479,139	-				-0.2
1,479,158	+				-0.0
1,479,511	+		Shew_1278	0.78	-1.2