Strain Fitness in Shewanella loihica PV-4 around Shew_1241

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
1,439,814	+		Shew_1239	0.88	+0.4
1,439,823	-		Shew_1239	0.88	-0.4
1,439,880	-				+0.2
1,440,580	+				+0.4
1,440,580	+				+0.3
1,440,588	-				+0.1
1,441,239	+				-0.2
1,441,286	+				-0.0
1,441,319	+		Shew_1242	0.13	-0.5
1,441,327	-		Shew_1242	0.15	-0.2
1,441,331	+		Shew_1242	0.16	+0.0
1,441,339	+		Shew_1242	0.17	+1.5
1,441,432	+		Shew_1242	0.37	+0.4
1,441,617	-		Shew_1242	0.76	+0.0
1,441,713	+				-0.5
1,441,917	-				-0.7
1,442,020	-		Shew_1243	0.19	-0.6