Strain Fitness in Shewanella loihica PV-4 around Shew_1225

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
1,422,135	+		Shew_1224	0.59	+0.5
1,422,312	+		Shew_1224	0.73	+0.7
1,422,312	+		Shew_1224	0.73	+0.7
1,422,320	-		Shew_1224	0.74	+0.3
1,422,720	+				+0.4
1,423,070	+		Shew_1225	0.34	+0.1
1,423,089	+		Shew_1225	0.39	-1.2
1,423,251	+		Shew_1225	0.77	-0.3
1,423,400	+				-0.1
1,423,400	+				-1.1
1,423,408	-				-0.7
1,423,732	+		Shew_1226	0.11	-0.3
1,423,740	-		Shew_1226	0.11	-0.4
1,424,128	+		Shew_1226	0.24	-0.2
1,424,201	+		Shew_1226	0.27	-0.2
1,424,251	-		Shew_1226	0.29	-0.3