Strain Fitness in Shewanella loihica PV-4 around Shew_0905

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
1,025,652	-				-0.1
1,025,921	+				+1.9
1,026,266	-		Shew_0904	0.46	+0.3
1,026,561	+				-0.0
1,026,561	+				-0.2
1,026,634	+				-1.2
1,026,733	+		Shew_0905	0.14	-0.5
1,026,733	+		Shew_0905	0.14	-0.0
1,026,733	+		Shew_0905	0.14	+0.0
1,026,751	-		Shew_0905	0.15	-4.2
1,026,965	+		Shew_0905	0.33	-1.0
1,027,019	+		Shew_0905	0.38	-0.2
1,027,492	-		Shew_0905	0.78	-2.7
1,027,978	-		Shew_0906	0.67	-0.1
1,027,993	-		Shew_0906	0.71	+0.5
1,028,347	+				-0.1
1,028,471	-		Shew_0907	0.14	+1.7
1,028,563	+		Shew_0907	0.18	+0.0
1,028,563	+		Shew_0907	0.18	-0.4
1,028,571	-		Shew_0907	0.18	+0.1
1,028,572	+		Shew_0907	0.18	-0.2
1,028,611	+		Shew_0907	0.19	-0.2
1,028,623	-		Shew_0907	0.20	+0.1