Strain Fitness in Shewanella loihica PV-4 around Shew_0814
Experiment: methylglyoxal 0.001 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | methylglyoxal 0.001 vol% |
---|---|---|---|---|---|
remove | |||||
937,563 | - | Shew_0813 | 0.73 | -0.4 | |
938,168 | + | -0.7 | |||
938,210 | - | -0.1 | |||
938,281 | - | -1.0 | |||
938,372 | + | Shew_0814 | 0.17 | +0.2 | |
938,777 | - | +0.1 | |||
939,056 | + | +0.1 | |||
939,369 | + | Shew_0815 | 0.23 | -0.6 | |
939,615 | + | Shew_0815 | 0.54 | -0.6 | |
939,623 | - | Shew_0815 | 0.55 | +0.9 | |
939,787 | + | Shew_0815 | 0.75 | -0.1 | |
939,789 | - | Shew_0815 | 0.75 | +1.1 | |
939,809 | + | Shew_0815 | 0.78 | -0.1 |
Or see this region's nucleotide sequence