Strain Fitness in Shewanella loihica PV-4 around Shew_0665

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
754,430	-		Shew_0664	0.48	+0.2
754,471	-		Shew_0664	0.52	+0.4
754,499	-		Shew_0664	0.54	-0.2
754,795	-		Shew_0664	0.79	-0.1
754,811	+		Shew_0664	0.81	+0.0
754,811	+		Shew_0664	0.81	-0.0
754,819	-		Shew_0664	0.81	-0.1
755,052	+				-0.1
755,147	-				-0.4
755,351	+				-1.9
755,397	+				-1.1
755,397	+				-1.8
755,442	+				-3.8
755,450	-				+0.7
755,457	-				-1.9
755,504	-				-0.9
755,504	-				-0.5
755,712	-		Shew_0665	0.19	-0.8
755,872	+		Shew_0665	0.28	-1.2
755,963	-		Shew_0665	0.33	-2.2
755,965	+		Shew_0665	0.33	-1.1
756,409	-		Shew_0665	0.58	-0.3
756,514	+		Shew_0665	0.64	+0.5
756,545	-		Shew_0665	0.66	-0.8
756,948	+		Shew_0665	0.88	-1.6
757,263	+				-1.3
757,378	-				-0.1
757,524	-		Shew_0666	0.17	-0.6
757,614	+		Shew_0666	0.23	-1.8
757,867	+		Shew_0666	0.37	-1.3