Strain Fitness in Shewanella loihica PV-4 around Shew_0650

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
736,936	-				-0.1
736,991	-				-1.5
737,069	+		Shew_0649	0.10	-0.0
737,115	-		Shew_0649	0.16	-0.9
737,205	-		Shew_0649	0.26	+0.0
737,249	-		Shew_0649	0.31	+0.5
737,285	+		Shew_0649	0.35	+0.7
737,293	-		Shew_0649	0.36	-1.2
737,322	+		Shew_0649	0.40	-0.3
737,417	-		Shew_0649	0.51	-0.2
737,704	-		Shew_0649	0.84	+1.3
737,812	-				+0.0
737,859	+				-0.8
737,864	+				+1.0
737,867	-				+1.0
737,869	+				-0.2
737,877	-				+0.0
737,925	-				+0.2
738,086	+		Shew_0650	0.18	+0.7
738,787	-		Shew_0650	0.70	-0.1
738,796	-		Shew_0650	0.70	+0.8
739,077	+				+0.1
739,099	+				+0.1
739,144	+				-0.5
739,154	+				+0.5
739,301	+				-0.1
739,550	+		Shew_0651	0.89	+0.1
739,560	+				-0.1
739,648	-				+0.7
739,808	+		Shew_0652	0.45	+0.4
739,871	+		Shew_0652	0.67	-0.1
739,871	+		Shew_0652	0.67	-0.1
739,871	+		Shew_0652	0.67	+1.4
739,871	+		Shew_0652	0.67	+0.1
739,879	-		Shew_0652	0.70	-0.5
739,926	+		Shew_0652	0.87	+0.2
739,926	+		Shew_0652	0.87	+0.2
739,933	-				-0.0
739,934	-				+0.9
740,002	-				+0.0
740,006	+				+0.1
740,006	+				+0.4
740,007	+				+0.2
740,012	+				+1.0
740,014	-				+0.2
740,014	-				-0.8
740,045	-				-0.5
740,100	-				-0.3
740,100	-				+0.3
740,108	+				-0.8
740,108	+				+0.2
740,108	+				+0.1
740,113	+				-0.1
740,113	+				+0.1
740,121	-				+0.6
740,121	-				-0.1