Strain Fitness in Shewanella loihica PV-4 around Shew_0099

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
109,442	-		Shew_0098	0.38	-1.4
109,581	-		Shew_0098	0.49	-0.4
109,642	-		Shew_0098	0.54	-0.2
109,661	+		Shew_0098	0.56	+0.2
109,868	+		Shew_0098	0.72	-1.6
109,869	+		Shew_0098	0.72	-0.6
109,877	-		Shew_0098	0.73	+1.4
109,877	-		Shew_0098	0.73	-1.5
109,893	-		Shew_0098	0.74	+0.2
109,944	-		Shew_0098	0.78	-0.0
110,136	+				+0.4
110,139	-				+0.4
110,139	-				+0.0
110,332	+		Shew_0099	0.15	+0.2
110,361	+		Shew_0099	0.19	-0.2
110,364	-		Shew_0099	0.20	-1.1
110,485	+		Shew_0099	0.38	-0.2
110,493	-		Shew_0099	0.39	-0.3
110,569	-		Shew_0099	0.50	-0.1
110,622	-		Shew_0099	0.58	-1.1
110,770	-		Shew_0099	0.80	-1.0
111,095	-				-0.3
111,136	+				-0.6
111,166	-				+0.4
111,225	+				-0.1
111,413	-		Shew_0101	0.23	-0.1
111,429	+		Shew_0101	0.27	-0.9
111,450	-		Shew_0101	0.32	-0.3
111,493	+		Shew_0101	0.43	+0.2
111,745	+				+0.8
111,879	+		Shew_0102	0.36	-0.3