Strain Fitness in Shewanella loihica PV-4 around Shew_0021

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
23,937	-		Shew_0020	0.33	-0.8
23,986	-		Shew_0020	0.37	-0.5
24,110	+		Shew_0020	0.46	-0.7
24,172	-		Shew_0020	0.51	-0.6
24,177	-		Shew_0020	0.52	-1.7
24,321	+		Shew_0020	0.62	-0.5
24,329	-		Shew_0020	0.63	-0.6
24,374	-		Shew_0020	0.66	-0.9
24,428	+		Shew_0020	0.71	-0.7
24,449	-		Shew_0020	0.72	-0.0
24,475	-		Shew_0020	0.74	-0.7
24,566	-		Shew_0020	0.81	-2.0
24,811	-				-1.4
25,148	+		Shew_0021	0.51	-1.4
25,223	-		Shew_0021	0.64	-0.6
25,227	+		Shew_0021	0.64	-2.1
25,283	-		Shew_0021	0.73	-1.2
25,307	+		Shew_0021	0.77	-1.1
25,365	+		Shew_0021	0.87	-2.8
25,375	+		Shew_0021	0.88	-3.0
25,375	+		Shew_0021	0.88	-1.9
25,418	-				-4.2
25,462	-				-0.1
25,795	+		Shew_0022	0.13	+2.2
25,823	+		Shew_0022	0.15	+1.8
25,823	+		Shew_0022	0.15	+2.4
25,933	-		Shew_0022	0.23	+1.8
25,967	+		Shew_0022	0.25	+1.8
26,182	-		Shew_0022	0.40	+1.8