Experiment: m.b. Chlorite 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2748 and Dshi_2749 are separated by 59 nucleotides Dshi_2749 and Dshi_2750 are separated by 478 nucleotides
Dshi_2748: Dshi_2748 - glutamyl-tRNA synthetase (RefSeq), at 2,909,448 to 2,910,770
_2748
Dshi_2749: Dshi_2749 - Di-haem cytochrome c peroxidase (RefSeq), at 2,910,830 to 2,912,143
_2749
Dshi_2750: Dshi_2750 - hypothetical protein (RefSeq), at 2,912,622 to 2,913,089
_2750
Position (kb)
2910
2911
2912
2913 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2910.942 kb on - strand at 2911.086 kb on - strand, within Dshi_2749 at 2911.131 kb on - strand, within Dshi_2749 at 2911.277 kb on + strand, within Dshi_2749 at 2911.277 kb on + strand, within Dshi_2749 at 2911.333 kb on - strand, within Dshi_2749 at 2911.359 kb on + strand, within Dshi_2749 at 2911.497 kb on + strand, within Dshi_2749 at 2911.497 kb on + strand, within Dshi_2749 at 2911.505 kb on - strand, within Dshi_2749 at 2911.505 kb on - strand, within Dshi_2749 at 2911.505 kb on - strand, within Dshi_2749 at 2911.507 kb on + strand, within Dshi_2749 at 2911.507 kb on + strand, within Dshi_2749 at 2911.583 kb on - strand, within Dshi_2749 at 2911.610 kb on + strand, within Dshi_2749 at 2911.618 kb on - strand, within Dshi_2749 at 2911.637 kb on - strand, within Dshi_2749 at 2911.785 kb on + strand, within Dshi_2749 at 2911.803 kb on - strand, within Dshi_2749 at 2911.975 kb on - strand, within Dshi_2749 at 2912.028 kb on + strand at 2912.093 kb on - strand at 2912.108 kb on - strand at 2912.131 kb on - strand at 2912.131 kb on - strand at 2912.178 kb on + strand at 2912.180 kb on - strand at 2912.251 kb on + strand at 2912.251 kb on + strand at 2912.335 kb on + strand at 2912.336 kb on + strand at 2912.343 kb on - strand at 2912.372 kb on + strand at 2912.460 kb on + strand at 2912.587 kb on + strand at 2912.588 kb on + strand at 2912.683 kb on + strand, within Dshi_2750 at 2912.841 kb on + strand, within Dshi_2750 at 2912.918 kb on - strand, within Dshi_2750 at 2913.093 kb on - strand at 2913.124 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.5 mM remove 2,910,942 - -0.0 2,911,086 - Dshi_2749 0.19 +0.5 2,911,131 - Dshi_2749 0.23 +0.1 2,911,277 + Dshi_2749 0.34 -3.5 2,911,277 + Dshi_2749 0.34 +0.6 2,911,333 - Dshi_2749 0.38 +0.2 2,911,359 + Dshi_2749 0.40 -0.3 2,911,497 + Dshi_2749 0.51 +0.6 2,911,497 + Dshi_2749 0.51 +1.8 2,911,505 - Dshi_2749 0.51 +0.5 2,911,505 - Dshi_2749 0.51 -0.1 2,911,505 - Dshi_2749 0.51 -1.3 2,911,507 + Dshi_2749 0.52 +0.4 2,911,507 + Dshi_2749 0.52 +0.8 2,911,583 - Dshi_2749 0.57 +0.4 2,911,610 + Dshi_2749 0.59 +0.1 2,911,618 - Dshi_2749 0.60 +0.2 2,911,637 - Dshi_2749 0.61 -0.3 2,911,785 + Dshi_2749 0.73 +0.3 2,911,803 - Dshi_2749 0.74 +1.0 2,911,975 - Dshi_2749 0.87 +0.5 2,912,028 + +1.0 2,912,093 - +1.5 2,912,108 - +0.3 2,912,131 - -0.1 2,912,131 - +0.9 2,912,178 + +0.5 2,912,180 - +0.6 2,912,251 + +0.6 2,912,251 + -0.2 2,912,335 + +0.2 2,912,336 + +0.0 2,912,343 - -1.1 2,912,372 + +0.5 2,912,460 + -0.1 2,912,587 + +0.2 2,912,588 + +0.2 2,912,683 + Dshi_2750 0.13 +0.2 2,912,841 + Dshi_2750 0.47 +0.4 2,912,918 - Dshi_2750 0.63 +0.9 2,913,093 - +0.5 2,913,124 - -1.1
Or see this region's nucleotide sequence