Experiment: m.b. Chlorite 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2634 and Dshi_2635 are separated by 27 nucleotides Dshi_2635 and Dshi_2636 are separated by 42 nucleotides Dshi_2636 and Dshi_2637 overlap by 1 nucleotides
Dshi_2634: Dshi_2634 - hypothetical protein (RefSeq), at 2,790,528 to 2,790,977
_2634
Dshi_2635: Dshi_2635 - pentapeptide repeat protein (RefSeq), at 2,791,005 to 2,791,742
_2635
Dshi_2636: Dshi_2636 - bacteriochlorophyll 4-vinyl reductase (RefSeq), at 2,791,785 to 2,792,408
_2636
Dshi_2637: Dshi_2637 - magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase (RefSeq), at 2,792,408 to 2,794,051
_2637
Position (kb)
2791
2792
2793 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2790.790 kb on - strand, within Dshi_2634 at 2790.790 kb on - strand, within Dshi_2634 at 2790.796 kb on + strand, within Dshi_2634 at 2790.821 kb on + strand, within Dshi_2634 at 2790.834 kb on - strand, within Dshi_2634 at 2790.987 kb on - strand at 2791.002 kb on + strand at 2791.035 kb on - strand at 2791.055 kb on - strand at 2791.129 kb on - strand, within Dshi_2635 at 2791.256 kb on + strand, within Dshi_2635 at 2791.296 kb on + strand, within Dshi_2635 at 2791.296 kb on + strand, within Dshi_2635 at 2791.296 kb on + strand, within Dshi_2635 at 2791.311 kb on - strand, within Dshi_2635 at 2791.311 kb on - strand, within Dshi_2635 at 2791.362 kb on - strand, within Dshi_2635 at 2791.449 kb on - strand, within Dshi_2635 at 2791.476 kb on + strand, within Dshi_2635 at 2791.486 kb on + strand, within Dshi_2635 at 2791.529 kb on - strand, within Dshi_2635 at 2791.591 kb on + strand, within Dshi_2635 at 2791.596 kb on + strand, within Dshi_2635 at 2791.596 kb on + strand, within Dshi_2635 at 2791.599 kb on - strand, within Dshi_2635 at 2791.604 kb on - strand, within Dshi_2635 at 2791.614 kb on - strand, within Dshi_2635 at 2791.614 kb on - strand, within Dshi_2635 at 2791.694 kb on - strand at 2791.931 kb on - strand, within Dshi_2636 at 2792.083 kb on + strand, within Dshi_2636 at 2792.112 kb on - strand, within Dshi_2636 at 2792.150 kb on - strand, within Dshi_2636 at 2792.291 kb on + strand, within Dshi_2636 at 2792.291 kb on + strand, within Dshi_2636 at 2792.333 kb on + strand, within Dshi_2636 at 2792.347 kb on - strand at 2792.347 kb on - strand at 2792.372 kb on - strand at 2792.387 kb on - strand at 2792.463 kb on - strand at 2792.522 kb on - strand at 2792.527 kb on - strand at 2792.559 kb on + strand at 2792.559 kb on + strand at 2792.673 kb on + strand, within Dshi_2637 at 2792.673 kb on + strand, within Dshi_2637 at 2792.686 kb on + strand, within Dshi_2637 at 2792.694 kb on - strand, within Dshi_2637 at 2792.699 kb on - strand, within Dshi_2637 at 2792.763 kb on - strand, within Dshi_2637 at 2792.769 kb on + strand, within Dshi_2637 at 2792.780 kb on + strand, within Dshi_2637 at 2792.798 kb on - strand, within Dshi_2637 at 2792.798 kb on - strand, within Dshi_2637 at 2792.817 kb on - strand, within Dshi_2637 at 2792.867 kb on + strand, within Dshi_2637 at 2792.868 kb on + strand, within Dshi_2637 at 2792.902 kb on + strand, within Dshi_2637 at 2792.905 kb on - strand, within Dshi_2637 at 2792.910 kb on + strand, within Dshi_2637 at 2792.954 kb on + strand, within Dshi_2637 at 2792.962 kb on - strand, within Dshi_2637 at 2792.962 kb on - strand, within Dshi_2637 at 2792.962 kb on - strand, within Dshi_2637 at 2792.965 kb on + strand, within Dshi_2637 at 2792.981 kb on - strand, within Dshi_2637 at 2793.005 kb on - strand, within Dshi_2637 at 2793.045 kb on - strand, within Dshi_2637 at 2793.103 kb on + strand, within Dshi_2637 at 2793.111 kb on - strand, within Dshi_2637 at 2793.153 kb on + strand, within Dshi_2637 at 2793.234 kb on + strand, within Dshi_2637 at 2793.264 kb on + strand, within Dshi_2637 at 2793.274 kb on + strand, within Dshi_2637 at 2793.370 kb on + strand, within Dshi_2637 at 2793.370 kb on - strand, within Dshi_2637
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.5 mM remove 2,790,790 - Dshi_2634 0.58 +1.1 2,790,790 - Dshi_2634 0.58 -1.5 2,790,796 + Dshi_2634 0.60 +0.1 2,790,821 + Dshi_2634 0.65 -0.0 2,790,834 - Dshi_2634 0.68 +0.3 2,790,987 - +0.3 2,791,002 + -1.7 2,791,035 - +0.4 2,791,055 - -0.2 2,791,129 - Dshi_2635 0.17 -0.6 2,791,256 + Dshi_2635 0.34 -0.2 2,791,296 + Dshi_2635 0.39 +0.2 2,791,296 + Dshi_2635 0.39 -0.7 2,791,296 + Dshi_2635 0.39 +0.1 2,791,311 - Dshi_2635 0.41 -0.6 2,791,311 - Dshi_2635 0.41 +0.5 2,791,362 - Dshi_2635 0.48 -1.4 2,791,449 - Dshi_2635 0.60 +0.1 2,791,476 + Dshi_2635 0.64 +0.2 2,791,486 + Dshi_2635 0.65 -0.6 2,791,529 - Dshi_2635 0.71 +0.1 2,791,591 + Dshi_2635 0.79 -1.6 2,791,596 + Dshi_2635 0.80 -0.2 2,791,596 + Dshi_2635 0.80 +0.2 2,791,599 - Dshi_2635 0.80 +0.8 2,791,604 - Dshi_2635 0.81 -2.0 2,791,614 - Dshi_2635 0.83 +0.5 2,791,614 - Dshi_2635 0.83 -1.2 2,791,694 - -0.6 2,791,931 - Dshi_2636 0.23 +0.4 2,792,083 + Dshi_2636 0.48 +0.8 2,792,112 - Dshi_2636 0.52 -0.4 2,792,150 - Dshi_2636 0.58 +0.1 2,792,291 + Dshi_2636 0.81 +0.1 2,792,291 + Dshi_2636 0.81 -0.3 2,792,333 + Dshi_2636 0.88 -0.1 2,792,347 - -0.0 2,792,347 - +0.3 2,792,372 - -0.2 2,792,387 - +0.1 2,792,463 - -0.4 2,792,522 - +0.7 2,792,527 - -0.4 2,792,559 + -0.2 2,792,559 + -0.5 2,792,673 + Dshi_2637 0.16 +0.6 2,792,673 + Dshi_2637 0.16 -3.0 2,792,686 + Dshi_2637 0.17 +0.1 2,792,694 - Dshi_2637 0.17 +0.1 2,792,699 - Dshi_2637 0.18 +0.2 2,792,763 - Dshi_2637 0.22 +0.3 2,792,769 + Dshi_2637 0.22 -0.3 2,792,780 + Dshi_2637 0.23 +1.2 2,792,798 - Dshi_2637 0.24 +0.8 2,792,798 - Dshi_2637 0.24 -0.2 2,792,817 - Dshi_2637 0.25 +0.1 2,792,867 + Dshi_2637 0.28 +0.2 2,792,868 + Dshi_2637 0.28 -0.6 2,792,902 + Dshi_2637 0.30 +0.3 2,792,905 - Dshi_2637 0.30 +0.1 2,792,910 + Dshi_2637 0.31 +1.8 2,792,954 + Dshi_2637 0.33 -0.6 2,792,962 - Dshi_2637 0.34 +0.7 2,792,962 - Dshi_2637 0.34 +0.0 2,792,962 - Dshi_2637 0.34 -0.1 2,792,965 + Dshi_2637 0.34 -0.4 2,792,981 - Dshi_2637 0.35 -1.6 2,793,005 - Dshi_2637 0.36 -0.2 2,793,045 - Dshi_2637 0.39 -0.1 2,793,103 + Dshi_2637 0.42 +0.3 2,793,111 - Dshi_2637 0.43 +1.2 2,793,153 + Dshi_2637 0.45 +0.2 2,793,234 + Dshi_2637 0.50 +0.2 2,793,264 + Dshi_2637 0.52 +0.8 2,793,274 + Dshi_2637 0.53 -0.2 2,793,370 + Dshi_2637 0.59 -1.1 2,793,370 - Dshi_2637 0.59 -0.2
Or see this region's nucleotide sequence