Experiment: m.b. Chlorite 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2023 and Dshi_2024 are separated by 260 nucleotides Dshi_2024 and Dshi_2025 are separated by 6 nucleotides Dshi_2025 and Dshi_2026 are separated by 61 nucleotides
Dshi_2023: Dshi_2023 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 2,142,820 to 2,144,499
_2023
Dshi_2024: Dshi_2024 - protein of unknown function DUF81 (RefSeq), at 2,144,760 to 2,145,515
_2024
Dshi_2025: Dshi_2025 - protein of unknown function DUF1498 (RefSeq), at 2,145,522 to 2,146,214
_2025
Dshi_2026: Dshi_2026 - LamB/YcsF family protein (RefSeq), at 2,146,276 to 2,147,046
_2026
Position (kb)
2144
2145
2146 Strain fitness (log2 ratio)
-1
0
1 at 2144.661 kb on + strand at 2144.669 kb on - strand at 2144.918 kb on - strand, within Dshi_2024 at 2145.053 kb on - strand, within Dshi_2024 at 2145.087 kb on - strand, within Dshi_2024 at 2145.144 kb on + strand, within Dshi_2024 at 2145.243 kb on + strand, within Dshi_2024 at 2145.571 kb on + strand at 2145.583 kb on + strand at 2145.611 kb on - strand, within Dshi_2025 at 2145.732 kb on - strand, within Dshi_2025 at 2145.768 kb on - strand, within Dshi_2025 at 2145.848 kb on - strand, within Dshi_2025 at 2145.954 kb on + strand, within Dshi_2025 at 2145.965 kb on - strand, within Dshi_2025 at 2146.326 kb on - strand at 2146.342 kb on + strand at 2146.355 kb on + strand, within Dshi_2026 at 2146.385 kb on - strand, within Dshi_2026 at 2146.436 kb on + strand, within Dshi_2026 at 2146.436 kb on + strand, within Dshi_2026
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.5 mM remove 2,144,661 + +0.1 2,144,669 - +0.3 2,144,918 - Dshi_2024 0.21 -0.5 2,145,053 - Dshi_2024 0.39 -0.5 2,145,087 - Dshi_2024 0.43 -0.2 2,145,144 + Dshi_2024 0.51 -0.2 2,145,243 + Dshi_2024 0.64 -1.4 2,145,571 + -0.0 2,145,583 + -0.7 2,145,611 - Dshi_2025 0.13 -0.8 2,145,732 - Dshi_2025 0.30 -0.5 2,145,768 - Dshi_2025 0.35 -0.7 2,145,848 - Dshi_2025 0.47 +0.4 2,145,954 + Dshi_2025 0.62 +0.3 2,145,965 - Dshi_2025 0.64 -0.8 2,146,326 - -0.4 2,146,342 + -0.1 2,146,355 + Dshi_2026 0.10 +0.5 2,146,385 - Dshi_2026 0.14 +0.5 2,146,436 + Dshi_2026 0.21 +0.3 2,146,436 + Dshi_2026 0.21 +1.1
Or see this region's nucleotide sequence