Experiment: m.b. Chlorite 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1953 and Dshi_1954 are separated by 31 nucleotides Dshi_1954 and Dshi_1955 are separated by 4 nucleotides
Dshi_1953: Dshi_1953 - putative secreted hydrolase (RefSeq), at 2,046,386 to 2,047,312
_1953
Dshi_1954: Dshi_1954 - short-chain dehydrogenase/reductase SDR (RefSeq), at 2,047,344 to 2,048,147
_1954
Dshi_1955: Dshi_1955 - short-chain dehydrogenase/reductase SDR (RefSeq), at 2,048,152 to 2,049,948
_1955
Position (kb)
2047
2048
2049 Strain fitness (log2 ratio)
-2
-1
0
1 at 2046.381 kb on + strand at 2046.412 kb on - strand at 2046.449 kb on + strand at 2046.458 kb on - strand at 2046.680 kb on - strand, within Dshi_1953 at 2046.680 kb on - strand, within Dshi_1953 at 2046.695 kb on - strand, within Dshi_1953 at 2046.768 kb on - strand, within Dshi_1953 at 2046.768 kb on - strand, within Dshi_1953 at 2046.869 kb on - strand, within Dshi_1953 at 2046.874 kb on - strand, within Dshi_1953 at 2046.930 kb on + strand at 2046.963 kb on + strand, within Dshi_1953 at 2047.026 kb on - strand, within Dshi_1953 at 2047.068 kb on + strand, within Dshi_1953 at 2047.147 kb on - strand, within Dshi_1953 at 2047.490 kb on + strand, within Dshi_1954 at 2047.564 kb on - strand, within Dshi_1954 at 2047.856 kb on - strand at 2047.856 kb on - strand, within Dshi_1954 at 2047.888 kb on + strand, within Dshi_1954 at 2048.133 kb on + strand at 2048.136 kb on - strand at 2048.218 kb on - strand at 2048.270 kb on + strand at 2048.288 kb on - strand at 2048.288 kb on - strand at 2048.427 kb on + strand, within Dshi_1955 at 2048.530 kb on - strand, within Dshi_1955 at 2048.562 kb on + strand, within Dshi_1955 at 2048.729 kb on - strand, within Dshi_1955 at 2048.852 kb on + strand, within Dshi_1955 at 2048.933 kb on + strand, within Dshi_1955 at 2048.973 kb on + strand, within Dshi_1955
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.5 mM remove 2,046,381 + -0.4 2,046,412 - +0.3 2,046,449 + +0.4 2,046,458 - +0.7 2,046,680 - Dshi_1953 0.32 -0.8 2,046,680 - Dshi_1953 0.32 +0.3 2,046,695 - Dshi_1953 0.33 +0.4 2,046,768 - Dshi_1953 0.41 +1.2 2,046,768 - Dshi_1953 0.41 +0.1 2,046,869 - Dshi_1953 0.52 +0.5 2,046,874 - Dshi_1953 0.53 -0.0 2,046,930 + -1.2 2,046,963 + Dshi_1953 0.62 +1.5 2,047,026 - Dshi_1953 0.69 +0.5 2,047,068 + Dshi_1953 0.74 +0.3 2,047,147 - Dshi_1953 0.82 +0.4 2,047,490 + Dshi_1954 0.18 +0.2 2,047,564 - Dshi_1954 0.27 +1.4 2,047,856 - -0.8 2,047,856 - Dshi_1954 0.64 +1.2 2,047,888 + Dshi_1954 0.68 +0.9 2,048,133 + -0.2 2,048,136 - -0.1 2,048,218 - +0.2 2,048,270 + +0.1 2,048,288 - +1.1 2,048,288 - -0.0 2,048,427 + Dshi_1955 0.15 +0.4 2,048,530 - Dshi_1955 0.21 +0.5 2,048,562 + Dshi_1955 0.23 +0.8 2,048,729 - Dshi_1955 0.32 -1.8 2,048,852 + Dshi_1955 0.39 +0.6 2,048,933 + Dshi_1955 0.43 +0.1 2,048,973 + Dshi_1955 0.46 +0.1
Or see this region's nucleotide sequence