Experiment: m.b. Chlorite 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1765 and Dshi_1766 are separated by 53 nucleotides Dshi_1766 and Dshi_1767 are separated by 150 nucleotides Dshi_1767 and Dshi_1768 are separated by 181 nucleotides
Dshi_1765: Dshi_1765 - ABC transporter related (RefSeq), at 1,830,691 to 1,832,526
_1765
Dshi_1766: Dshi_1766 - peptidoglycan-binding LysM (RefSeq), at 1,832,580 to 1,834,175
_1766
Dshi_1767: Dshi_1767 - hypothetical protein (RefSeq), at 1,834,326 to 1,834,865
_1767
Dshi_1768: Dshi_1768 - 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase (RefSeq), at 1,835,047 to 1,835,688
_1768
Position (kb)
1832
1833
1834
1835 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1831.629 kb on - strand, within Dshi_1765 at 1831.674 kb on + strand, within Dshi_1765 at 1831.675 kb on + strand, within Dshi_1765 at 1831.687 kb on - strand, within Dshi_1765 at 1831.753 kb on + strand, within Dshi_1765 at 1831.834 kb on + strand, within Dshi_1765 at 1831.933 kb on - strand, within Dshi_1765 at 1831.978 kb on - strand, within Dshi_1765 at 1832.007 kb on + strand, within Dshi_1765 at 1832.072 kb on - strand, within Dshi_1765 at 1832.082 kb on - strand, within Dshi_1765 at 1832.586 kb on - strand at 1832.717 kb on + strand at 1833.165 kb on - strand, within Dshi_1766 at 1833.175 kb on - strand, within Dshi_1766 at 1833.433 kb on - strand, within Dshi_1766 at 1834.343 kb on + strand at 1834.444 kb on + strand, within Dshi_1767 at 1834.457 kb on - strand, within Dshi_1767 at 1834.574 kb on + strand, within Dshi_1767 at 1834.643 kb on - strand, within Dshi_1767 at 1834.674 kb on + strand, within Dshi_1767 at 1834.847 kb on - strand at 1834.947 kb on - strand at 1834.947 kb on - strand at 1834.963 kb on + strand at 1834.995 kb on + strand at 1835.037 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.5 mM remove 1,831,629 - Dshi_1765 0.51 -0.2 1,831,674 + Dshi_1765 0.54 -0.2 1,831,675 + Dshi_1765 0.54 -0.9 1,831,687 - Dshi_1765 0.54 +0.9 1,831,753 + Dshi_1765 0.58 -0.4 1,831,834 + Dshi_1765 0.62 +0.3 1,831,933 - Dshi_1765 0.68 -0.7 1,831,978 - Dshi_1765 0.70 +1.4 1,832,007 + Dshi_1765 0.72 -0.1 1,832,072 - Dshi_1765 0.75 -0.8 1,832,082 - Dshi_1765 0.76 -0.3 1,832,586 - +0.5 1,832,717 + -0.0 1,833,165 - Dshi_1766 0.37 -0.5 1,833,175 - Dshi_1766 0.37 -1.2 1,833,433 - Dshi_1766 0.53 -1.9 1,834,343 + -0.3 1,834,444 + Dshi_1767 0.22 +0.3 1,834,457 - Dshi_1767 0.24 +0.7 1,834,574 + Dshi_1767 0.46 -0.1 1,834,643 - Dshi_1767 0.59 -0.4 1,834,674 + Dshi_1767 0.64 +0.4 1,834,847 - +0.2 1,834,947 - -0.2 1,834,947 - +2.4 1,834,963 + -0.6 1,834,995 + -0.9 1,835,037 - +1.0
Or see this region's nucleotide sequence