Experiment: m.b. Chlorite 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1619 and Dshi_1620 are separated by 297 nucleotides Dshi_1620 and Dshi_1621 are separated by 4 nucleotides
Dshi_1619: Dshi_1619 - Peptidoglycan-binding domain 1 protein (RefSeq), at 1,683,367 to 1,684,977
_1619
Dshi_1620: Dshi_1620 - protein of unknown function DUF882 (RefSeq), at 1,685,275 to 1,685,844
_1620
Dshi_1621: Dshi_1621 - PfkB domain protein (RefSeq), at 1,685,849 to 1,686,799
_1621
Position (kb)
1685
1686 Strain fitness (log2 ratio)
-2
-1
0
1 at 1684.375 kb on - strand, within Dshi_1619 at 1684.375 kb on - strand, within Dshi_1619 at 1684.375 kb on - strand, within Dshi_1619 at 1684.382 kb on - strand, within Dshi_1619 at 1684.422 kb on - strand, within Dshi_1619 at 1684.437 kb on + strand, within Dshi_1619 at 1684.502 kb on + strand, within Dshi_1619 at 1684.520 kb on - strand, within Dshi_1619 at 1684.676 kb on + strand, within Dshi_1619 at 1684.684 kb on - strand, within Dshi_1619 at 1684.739 kb on + strand, within Dshi_1619 at 1684.808 kb on + strand, within Dshi_1619 at 1684.860 kb on + strand at 1684.860 kb on + strand at 1684.934 kb on + strand at 1684.934 kb on + strand at 1684.942 kb on - strand at 1684.951 kb on + strand at 1684.952 kb on + strand at 1684.959 kb on + strand at 1684.967 kb on - strand at 1684.987 kb on - strand at 1685.212 kb on + strand at 1685.224 kb on + strand at 1685.232 kb on - strand at 1685.232 kb on - strand at 1685.232 kb on - strand at 1685.238 kb on + strand at 1685.248 kb on + strand at 1685.248 kb on + strand at 1685.248 kb on + strand at 1685.256 kb on - strand at 1685.272 kb on + strand at 1685.283 kb on + strand at 1685.291 kb on - strand at 1685.343 kb on - strand, within Dshi_1620 at 1685.363 kb on - strand, within Dshi_1620 at 1685.368 kb on + strand, within Dshi_1620 at 1685.439 kb on + strand, within Dshi_1620 at 1685.457 kb on + strand, within Dshi_1620 at 1685.459 kb on - strand, within Dshi_1620 at 1685.459 kb on - strand, within Dshi_1620 at 1685.491 kb on - strand, within Dshi_1620 at 1685.877 kb on + strand at 1685.984 kb on - strand, within Dshi_1621 at 1686.060 kb on - strand, within Dshi_1621 at 1686.069 kb on + strand, within Dshi_1621 at 1686.077 kb on - strand, within Dshi_1621 at 1686.077 kb on - strand, within Dshi_1621 at 1686.162 kb on + strand, within Dshi_1621 at 1686.222 kb on + strand, within Dshi_1621 at 1686.278 kb on - strand, within Dshi_1621 at 1686.306 kb on - strand, within Dshi_1621 at 1686.369 kb on - strand, within Dshi_1621 at 1686.408 kb on + strand, within Dshi_1621 at 1686.485 kb on + strand, within Dshi_1621 at 1686.587 kb on - strand, within Dshi_1621 at 1686.609 kb on - strand, within Dshi_1621 at 1686.609 kb on - strand, within Dshi_1621 at 1686.609 kb on - strand, within Dshi_1621 at 1686.653 kb on + strand, within Dshi_1621 at 1686.686 kb on - strand, within Dshi_1621 at 1686.703 kb on + strand, within Dshi_1621 at 1686.745 kb on - strand at 1686.758 kb on + strand at 1686.819 kb on - strand at 1686.824 kb on - strand at 1686.824 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.5 mM remove 1,684,375 - Dshi_1619 0.63 -1.3 1,684,375 - Dshi_1619 0.63 +0.3 1,684,375 - Dshi_1619 0.63 -0.7 1,684,382 - Dshi_1619 0.63 +1.0 1,684,422 - Dshi_1619 0.65 +0.4 1,684,437 + Dshi_1619 0.66 +0.5 1,684,502 + Dshi_1619 0.70 -1.0 1,684,520 - Dshi_1619 0.72 +0.4 1,684,676 + Dshi_1619 0.81 +0.8 1,684,684 - Dshi_1619 0.82 -1.2 1,684,739 + Dshi_1619 0.85 +1.5 1,684,808 + Dshi_1619 0.89 +1.2 1,684,860 + +0.4 1,684,860 + -0.8 1,684,934 + -1.6 1,684,934 + -0.7 1,684,942 - -0.1 1,684,951 + -0.2 1,684,952 + +0.3 1,684,959 + -0.9 1,684,967 - -0.6 1,684,987 - +0.5 1,685,212 + +1.6 1,685,224 + -0.5 1,685,232 - +0.4 1,685,232 - -0.4 1,685,232 - -0.5 1,685,238 + -0.5 1,685,248 + -0.6 1,685,248 + -1.4 1,685,248 + +1.5 1,685,256 - +0.0 1,685,272 + -0.4 1,685,283 + -0.8 1,685,291 - +0.8 1,685,343 - Dshi_1620 0.12 -1.0 1,685,363 - Dshi_1620 0.15 -2.0 1,685,368 + Dshi_1620 0.16 +0.2 1,685,439 + Dshi_1620 0.29 -1.2 1,685,457 + Dshi_1620 0.32 -0.8 1,685,459 - Dshi_1620 0.32 -0.5 1,685,459 - Dshi_1620 0.32 -0.2 1,685,491 - Dshi_1620 0.38 -0.6 1,685,877 + +1.0 1,685,984 - Dshi_1621 0.14 -1.2 1,686,060 - Dshi_1621 0.22 -0.2 1,686,069 + Dshi_1621 0.23 -0.3 1,686,077 - Dshi_1621 0.24 +1.0 1,686,077 - Dshi_1621 0.24 +1.1 1,686,162 + Dshi_1621 0.33 +0.3 1,686,222 + Dshi_1621 0.39 +0.8 1,686,278 - Dshi_1621 0.45 -0.8 1,686,306 - Dshi_1621 0.48 +0.5 1,686,369 - Dshi_1621 0.55 -0.2 1,686,408 + Dshi_1621 0.59 -0.2 1,686,485 + Dshi_1621 0.67 +0.0 1,686,587 - Dshi_1621 0.78 -0.1 1,686,609 - Dshi_1621 0.80 +0.4 1,686,609 - Dshi_1621 0.80 -1.2 1,686,609 - Dshi_1621 0.80 -0.1 1,686,653 + Dshi_1621 0.85 +1.0 1,686,686 - Dshi_1621 0.88 +0.5 1,686,703 + Dshi_1621 0.90 +0.3 1,686,745 - -0.2 1,686,758 + -0.6 1,686,819 - -1.1 1,686,824 - -0.5 1,686,824 - -0.0
Or see this region's nucleotide sequence