Experiment: m.b. Chlorite 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1421 and Dshi_1422 are separated by 56 nucleotides Dshi_1422 and Dshi_1423 overlap by 1 nucleotides Dshi_1423 and Dshi_1424 overlap by 1 nucleotides
Dshi_1421: Dshi_1421 - ribose ABC transporter, substrate-binding protein (RefSeq), at 1,473,533 to 1,474,705
_1421
Dshi_1422: Dshi_1422 - ABC transporter related (RefSeq), at 1,474,762 to 1,476,309
_1422
Dshi_1423: Dshi_1423 - inner-membrane translocator (RefSeq), at 1,476,309 to 1,477,271
_1423
Dshi_1424: Dshi_1424 - inner-membrane translocator (RefSeq), at 1,477,271 to 1,478,302
_1424
Position (kb)
1474
1475
1476
1477 Strain fitness (log2 ratio)
-1
0
1
2 at 1473.767 kb on + strand, within Dshi_1421 at 1473.775 kb on - strand, within Dshi_1421 at 1473.943 kb on + strand, within Dshi_1421 at 1473.967 kb on + strand, within Dshi_1421 at 1473.975 kb on + strand, within Dshi_1421 at 1473.975 kb on - strand, within Dshi_1421 at 1473.975 kb on - strand, within Dshi_1421 at 1474.053 kb on + strand, within Dshi_1421 at 1474.077 kb on - strand, within Dshi_1421 at 1474.210 kb on - strand, within Dshi_1421 at 1474.215 kb on - strand, within Dshi_1421 at 1474.490 kb on + strand, within Dshi_1421 at 1474.511 kb on - strand, within Dshi_1421 at 1474.571 kb on + strand, within Dshi_1421 at 1474.745 kb on + strand at 1474.815 kb on + strand at 1474.947 kb on - strand, within Dshi_1422 at 1475.372 kb on - strand, within Dshi_1422 at 1475.379 kb on - strand, within Dshi_1422 at 1475.493 kb on - strand, within Dshi_1422 at 1475.665 kb on - strand, within Dshi_1422 at 1475.692 kb on + strand, within Dshi_1422 at 1475.692 kb on + strand, within Dshi_1422 at 1475.730 kb on + strand, within Dshi_1422 at 1475.758 kb on + strand, within Dshi_1422 at 1475.766 kb on - strand, within Dshi_1422 at 1475.875 kb on - strand, within Dshi_1422 at 1475.877 kb on + strand, within Dshi_1422 at 1475.891 kb on - strand, within Dshi_1422 at 1475.893 kb on - strand, within Dshi_1422 at 1476.002 kb on + strand, within Dshi_1422 at 1476.012 kb on + strand, within Dshi_1422 at 1476.083 kb on - strand, within Dshi_1422 at 1476.088 kb on - strand, within Dshi_1422 at 1476.118 kb on + strand, within Dshi_1422 at 1476.118 kb on + strand, within Dshi_1422 at 1476.403 kb on + strand at 1476.403 kb on + strand at 1476.412 kb on + strand, within Dshi_1423 at 1476.412 kb on + strand, within Dshi_1423 at 1476.501 kb on + strand, within Dshi_1423 at 1476.501 kb on + strand, within Dshi_1423 at 1476.677 kb on - strand, within Dshi_1423 at 1476.809 kb on - strand, within Dshi_1423 at 1476.816 kb on + strand, within Dshi_1423 at 1476.900 kb on + strand, within Dshi_1423 at 1476.900 kb on + strand, within Dshi_1423 at 1476.900 kb on + strand, within Dshi_1423 at 1476.900 kb on + strand, within Dshi_1423 at 1476.900 kb on + strand, within Dshi_1423 at 1476.900 kb on + strand, within Dshi_1423 at 1476.900 kb on + strand, within Dshi_1423 at 1476.908 kb on - strand, within Dshi_1423 at 1476.908 kb on - strand, within Dshi_1423 at 1476.908 kb on - strand, within Dshi_1423 at 1476.908 kb on - strand, within Dshi_1423 at 1477.228 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.5 mM remove 1,473,767 + Dshi_1421 0.20 +0.6 1,473,775 - Dshi_1421 0.21 +0.1 1,473,943 + Dshi_1421 0.35 +0.4 1,473,967 + Dshi_1421 0.37 -0.2 1,473,975 + Dshi_1421 0.38 -0.9 1,473,975 - Dshi_1421 0.38 +0.9 1,473,975 - Dshi_1421 0.38 -0.2 1,474,053 + Dshi_1421 0.44 -0.1 1,474,077 - Dshi_1421 0.46 -0.6 1,474,210 - Dshi_1421 0.58 +0.5 1,474,215 - Dshi_1421 0.58 +1.1 1,474,490 + Dshi_1421 0.82 -0.2 1,474,511 - Dshi_1421 0.83 +1.8 1,474,571 + Dshi_1421 0.88 -1.2 1,474,745 + +0.8 1,474,815 + -0.5 1,474,947 - Dshi_1422 0.12 -0.1 1,475,372 - Dshi_1422 0.39 -0.6 1,475,379 - Dshi_1422 0.40 -0.5 1,475,493 - Dshi_1422 0.47 +0.2 1,475,665 - Dshi_1422 0.58 +0.1 1,475,692 + Dshi_1422 0.60 +2.1 1,475,692 + Dshi_1422 0.60 +1.4 1,475,730 + Dshi_1422 0.63 -0.8 1,475,758 + Dshi_1422 0.64 -0.6 1,475,766 - Dshi_1422 0.65 -0.9 1,475,875 - Dshi_1422 0.72 -0.7 1,475,877 + Dshi_1422 0.72 -0.4 1,475,891 - Dshi_1422 0.73 -0.5 1,475,893 - Dshi_1422 0.73 -0.4 1,476,002 + Dshi_1422 0.80 -0.6 1,476,012 + Dshi_1422 0.81 +0.3 1,476,083 - Dshi_1422 0.85 +0.1 1,476,088 - Dshi_1422 0.86 -0.7 1,476,118 + Dshi_1422 0.88 +1.0 1,476,118 + Dshi_1422 0.88 -0.6 1,476,403 + -0.1 1,476,403 + -0.2 1,476,412 + Dshi_1423 0.11 -0.6 1,476,412 + Dshi_1423 0.11 -0.2 1,476,501 + Dshi_1423 0.20 -0.1 1,476,501 + Dshi_1423 0.20 +0.2 1,476,677 - Dshi_1423 0.38 +1.2 1,476,809 - Dshi_1423 0.52 +0.7 1,476,816 + Dshi_1423 0.53 -0.3 1,476,900 + Dshi_1423 0.61 -0.4 1,476,900 + Dshi_1423 0.61 -0.2 1,476,900 + Dshi_1423 0.61 +0.0 1,476,900 + Dshi_1423 0.61 +0.1 1,476,900 + Dshi_1423 0.61 -0.3 1,476,900 + Dshi_1423 0.61 +0.0 1,476,900 + Dshi_1423 0.61 +0.7 1,476,908 - Dshi_1423 0.62 +0.7 1,476,908 - Dshi_1423 0.62 +0.6 1,476,908 - Dshi_1423 0.62 +0.2 1,476,908 - Dshi_1423 0.62 +0.2 1,477,228 + +0.1
Or see this region's nucleotide sequence