Experiment: m.b. Chlorite 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1389 and Dshi_1390 are separated by 30 nucleotides Dshi_1390 and Dshi_1391 are separated by 47 nucleotides Dshi_1391 and Dshi_1392 overlap by 4 nucleotides Dshi_1392 and Dshi_1393 are separated by 9 nucleotides
Dshi_1389: Dshi_1389 - deoxyribodipyrimidine photo-lyase, putative (RefSeq), at 1,442,883 to 1,444,100
_1389
Dshi_1390: Dshi_1390 - NADH:ubiquinone oxidoreductase 17.2 kD subunit (RefSeq), at 1,444,131 to 1,444,565
_1390
Dshi_1391: Dshi_1391 - Mammalian cell entry related domain protein (RefSeq), at 1,444,613 to 1,445,059
_1391
Dshi_1392: Dshi_1392 - hypothetical protein (RefSeq), at 1,445,056 to 1,445,598
_1392
Dshi_1393: Dshi_1393 - hypothetical protein (RefSeq), at 1,445,608 to 1,446,195
_1393
Position (kb)
1444
1445
1446 Strain fitness (log2 ratio)
-1
0
1 at 1443.722 kb on - strand, within Dshi_1389 at 1443.722 kb on - strand, within Dshi_1389 at 1443.841 kb on - strand, within Dshi_1389 at 1443.883 kb on + strand, within Dshi_1389 at 1443.883 kb on + strand, within Dshi_1389 at 1443.908 kb on + strand, within Dshi_1389 at 1444.739 kb on + strand, within Dshi_1391 at 1444.759 kb on - strand, within Dshi_1391 at 1444.997 kb on + strand, within Dshi_1391 at 1445.002 kb on + strand, within Dshi_1391 at 1445.013 kb on + strand, within Dshi_1391 at 1445.080 kb on + strand at 1445.088 kb on - strand at 1445.114 kb on + strand, within Dshi_1392 at 1445.501 kb on - strand, within Dshi_1392 at 1445.511 kb on - strand, within Dshi_1392 at 1445.573 kb on + strand at 1445.600 kb on - strand at 1445.632 kb on + strand at 1445.683 kb on - strand, within Dshi_1393 at 1445.724 kb on + strand, within Dshi_1393 at 1445.816 kb on - strand, within Dshi_1393 at 1445.846 kb on - strand, within Dshi_1393 at 1445.978 kb on - strand, within Dshi_1393 at 1446.025 kb on + strand, within Dshi_1393 at 1446.033 kb on - strand, within Dshi_1393
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.5 mM remove 1,443,722 - Dshi_1389 0.69 -0.2 1,443,722 - Dshi_1389 0.69 +0.6 1,443,841 - Dshi_1389 0.79 +0.9 1,443,883 + Dshi_1389 0.82 -0.2 1,443,883 + Dshi_1389 0.82 -0.6 1,443,908 + Dshi_1389 0.84 +0.1 1,444,739 + Dshi_1391 0.28 -0.7 1,444,759 - Dshi_1391 0.33 -1.6 1,444,997 + Dshi_1391 0.86 -0.3 1,445,002 + Dshi_1391 0.87 +0.6 1,445,013 + Dshi_1391 0.89 -0.9 1,445,080 + -1.4 1,445,088 - -0.3 1,445,114 + Dshi_1392 0.11 -0.2 1,445,501 - Dshi_1392 0.82 -0.3 1,445,511 - Dshi_1392 0.84 +0.7 1,445,573 + +0.5 1,445,600 - +0.3 1,445,632 + -0.1 1,445,683 - Dshi_1393 0.13 +0.0 1,445,724 + Dshi_1393 0.20 -0.0 1,445,816 - Dshi_1393 0.35 -0.3 1,445,846 - Dshi_1393 0.40 +0.6 1,445,978 - Dshi_1393 0.63 +0.5 1,446,025 + Dshi_1393 0.71 +0.7 1,446,033 - Dshi_1393 0.72 +0.4
Or see this region's nucleotide sequence