Experiment: m.b. Chlorite 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1371 and Dshi_1372 are separated by 12 nucleotides Dshi_1372 and Dshi_1373 overlap by 4 nucleotides
Dshi_1371: Dshi_1371 - ABC transporter related (RefSeq), at 1,424,219 to 1,425,220
_1371
Dshi_1372: Dshi_1372 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 1,425,233 to 1,426,150
_1372
Dshi_1373: Dshi_1373 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 1,426,147 to 1,427,058
_1373
Position (kb)
1425
1426
1427 Strain fitness (log2 ratio)
-1
0
1
2 at 1424.297 kb on - strand at 1424.469 kb on + strand, within Dshi_1371 at 1424.648 kb on - strand, within Dshi_1371 at 1424.737 kb on + strand, within Dshi_1371 at 1424.770 kb on + strand, within Dshi_1371 at 1424.857 kb on + strand, within Dshi_1371 at 1424.976 kb on - strand, within Dshi_1371 at 1425.123 kb on + strand at 1425.244 kb on - strand at 1425.318 kb on - strand at 1425.325 kb on + strand, within Dshi_1372 at 1425.631 kb on - strand, within Dshi_1372 at 1425.827 kb on - strand, within Dshi_1372 at 1425.841 kb on - strand, within Dshi_1372 at 1425.852 kb on + strand, within Dshi_1372 at 1425.860 kb on - strand, within Dshi_1372 at 1426.040 kb on + strand, within Dshi_1372 at 1426.368 kb on + strand, within Dshi_1373 at 1426.376 kb on - strand, within Dshi_1373 at 1426.515 kb on - strand, within Dshi_1373 at 1426.698 kb on - strand, within Dshi_1373 at 1426.721 kb on + strand, within Dshi_1373 at 1426.797 kb on + strand, within Dshi_1373 at 1426.844 kb on + strand, within Dshi_1373 at 1426.849 kb on + strand, within Dshi_1373 at 1426.875 kb on + strand, within Dshi_1373 at 1426.967 kb on - strand at 1427.034 kb on + strand at 1427.124 kb on + strand at 1427.148 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.5 mM remove 1,424,297 - -0.8 1,424,469 + Dshi_1371 0.25 +0.8 1,424,648 - Dshi_1371 0.43 +0.0 1,424,737 + Dshi_1371 0.52 +0.8 1,424,770 + Dshi_1371 0.55 +0.3 1,424,857 + Dshi_1371 0.64 -0.3 1,424,976 - Dshi_1371 0.76 +1.9 1,425,123 + -0.4 1,425,244 - -0.2 1,425,318 - -0.1 1,425,325 + Dshi_1372 0.10 -0.2 1,425,631 - Dshi_1372 0.43 -1.7 1,425,827 - Dshi_1372 0.65 -1.3 1,425,841 - Dshi_1372 0.66 -0.4 1,425,852 + Dshi_1372 0.67 +0.5 1,425,860 - Dshi_1372 0.68 -1.5 1,426,040 + Dshi_1372 0.88 -0.3 1,426,368 + Dshi_1373 0.24 +0.9 1,426,376 - Dshi_1373 0.25 +0.2 1,426,515 - Dshi_1373 0.40 -0.2 1,426,698 - Dshi_1373 0.60 -0.4 1,426,721 + Dshi_1373 0.63 -0.7 1,426,797 + Dshi_1373 0.71 -1.2 1,426,844 + Dshi_1373 0.76 +0.2 1,426,849 + Dshi_1373 0.77 -0.1 1,426,875 + Dshi_1373 0.80 +1.1 1,426,967 - +0.0 1,427,034 + +0.5 1,427,124 + -0.9 1,427,148 + -0.6
Or see this region's nucleotide sequence