Experiment: m.b. Chlorite 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1338 and Dshi_1339 are separated by 134 nucleotides Dshi_1339 and Dshi_1340 are separated by 114 nucleotides
Dshi_1338: Dshi_1338 - UspA domain protein (RefSeq), at 1,391,461 to 1,392,303
_1338
Dshi_1339: Dshi_1339 - short-chain dehydrogenase/reductase SDR (RefSeq), at 1,392,438 to 1,393,217
_1339
Dshi_1340: Dshi_1340 - Na+/solute symporter (RefSeq), at 1,393,332 to 1,394,720
_1340
Position (kb)
1392
1393
1394 Strain fitness (log2 ratio)
-1
0
1 at 1391.488 kb on - strand at 1391.556 kb on - strand, within Dshi_1338 at 1391.565 kb on + strand, within Dshi_1338 at 1391.671 kb on - strand, within Dshi_1338 at 1391.706 kb on - strand, within Dshi_1338 at 1391.732 kb on + strand, within Dshi_1338 at 1391.785 kb on + strand, within Dshi_1338 at 1391.796 kb on - strand, within Dshi_1338 at 1391.826 kb on + strand, within Dshi_1338 at 1392.100 kb on + strand, within Dshi_1338 at 1392.108 kb on - strand, within Dshi_1338 at 1392.259 kb on + strand at 1392.335 kb on + strand at 1392.343 kb on - strand at 1392.381 kb on + strand at 1392.529 kb on + strand, within Dshi_1339 at 1392.681 kb on + strand, within Dshi_1339 at 1392.737 kb on + strand, within Dshi_1339 at 1393.038 kb on + strand, within Dshi_1339 at 1393.046 kb on - strand, within Dshi_1339 at 1393.051 kb on - strand, within Dshi_1339 at 1393.410 kb on + strand at 1393.455 kb on + strand at 1393.750 kb on - strand, within Dshi_1340 at 1393.755 kb on - strand, within Dshi_1340 at 1393.805 kb on - strand, within Dshi_1340 at 1393.889 kb on - strand, within Dshi_1340 at 1394.029 kb on - strand, within Dshi_1340 at 1394.029 kb on - strand, within Dshi_1340 at 1394.120 kb on - strand, within Dshi_1340
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.5 mM remove 1,391,488 - -0.5 1,391,556 - Dshi_1338 0.11 -0.2 1,391,565 + Dshi_1338 0.12 -1.1 1,391,671 - Dshi_1338 0.25 +0.6 1,391,706 - Dshi_1338 0.29 -0.1 1,391,732 + Dshi_1338 0.32 -0.2 1,391,785 + Dshi_1338 0.38 -0.5 1,391,796 - Dshi_1338 0.40 +0.8 1,391,826 + Dshi_1338 0.43 +0.3 1,392,100 + Dshi_1338 0.76 +0.3 1,392,108 - Dshi_1338 0.77 -0.3 1,392,259 + +0.2 1,392,335 + -0.4 1,392,343 - -0.7 1,392,381 + +1.4 1,392,529 + Dshi_1339 0.12 +0.8 1,392,681 + Dshi_1339 0.31 +0.6 1,392,737 + Dshi_1339 0.38 -0.2 1,393,038 + Dshi_1339 0.77 +0.1 1,393,046 - Dshi_1339 0.78 -0.0 1,393,051 - Dshi_1339 0.79 -1.0 1,393,410 + +0.4 1,393,455 + -1.0 1,393,750 - Dshi_1340 0.30 +0.7 1,393,755 - Dshi_1340 0.30 +1.3 1,393,805 - Dshi_1340 0.34 +0.7 1,393,889 - Dshi_1340 0.40 +0.6 1,394,029 - Dshi_1340 0.50 -0.9 1,394,029 - Dshi_1340 0.50 +0.2 1,394,120 - Dshi_1340 0.57 +0.4
Or see this region's nucleotide sequence