Experiment: m.b. Chlorite 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1275 and Dshi_1276 are separated by 1 nucleotides Dshi_1276 and Dshi_1277 overlap by 14 nucleotides Dshi_1277 and Dshi_1278 overlap by 4 nucleotides
Dshi_1275: Dshi_1275 - Monosaccharide-transporting ATPase (RefSeq), at 1,325,167 to 1,326,291
_1275
Dshi_1276: Dshi_1276 - ABC transporter related (RefSeq), at 1,326,293 to 1,327,087
_1276
Dshi_1277: Dshi_1277 - hypothetical protein (RefSeq), at 1,327,074 to 1,327,316
_1277
Dshi_1278: Dshi_1278 - Phytanoyl-CoA dioxygenase (RefSeq), at 1,327,313 to 1,328,482
_1278
Position (kb)
1326
1327
1328 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1325.397 kb on + strand, within Dshi_1275 at 1325.460 kb on - strand, within Dshi_1275 at 1325.479 kb on + strand, within Dshi_1275 at 1325.484 kb on + strand, within Dshi_1275 at 1325.487 kb on - strand, within Dshi_1275 at 1325.487 kb on - strand, within Dshi_1275 at 1325.638 kb on + strand, within Dshi_1275 at 1325.707 kb on - strand, within Dshi_1275 at 1325.774 kb on - strand, within Dshi_1275 at 1325.792 kb on + strand, within Dshi_1275 at 1325.869 kb on - strand, within Dshi_1275 at 1325.877 kb on - strand, within Dshi_1275 at 1326.063 kb on - strand, within Dshi_1275 at 1326.146 kb on + strand, within Dshi_1275 at 1326.265 kb on - strand at 1326.265 kb on - strand at 1326.306 kb on - strand at 1326.306 kb on - strand at 1326.459 kb on + strand, within Dshi_1276 at 1326.692 kb on - strand, within Dshi_1276 at 1326.731 kb on - strand, within Dshi_1276 at 1326.786 kb on - strand, within Dshi_1276 at 1326.951 kb on + strand, within Dshi_1276 at 1326.966 kb on + strand, within Dshi_1276 at 1326.987 kb on + strand, within Dshi_1276 at 1327.114 kb on - strand, within Dshi_1277 at 1327.178 kb on - strand, within Dshi_1277 at 1327.195 kb on + strand, within Dshi_1277 at 1327.195 kb on + strand, within Dshi_1277 at 1327.203 kb on - strand, within Dshi_1277 at 1327.238 kb on - strand, within Dshi_1277 at 1327.322 kb on + strand at 1327.362 kb on - strand at 1327.537 kb on + strand, within Dshi_1278 at 1327.539 kb on + strand, within Dshi_1278 at 1327.547 kb on - strand, within Dshi_1278 at 1327.565 kb on + strand, within Dshi_1278 at 1327.644 kb on - strand, within Dshi_1278 at 1327.768 kb on + strand, within Dshi_1278 at 1327.827 kb on + strand, within Dshi_1278 at 1327.930 kb on - strand, within Dshi_1278 at 1327.961 kb on + strand, within Dshi_1278 at 1328.057 kb on - strand, within Dshi_1278 at 1328.059 kb on - strand, within Dshi_1278
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.5 mM remove 1,325,397 + Dshi_1275 0.20 +1.2 1,325,460 - Dshi_1275 0.26 +0.1 1,325,479 + Dshi_1275 0.28 +0.9 1,325,484 + Dshi_1275 0.28 -0.2 1,325,487 - Dshi_1275 0.28 +0.3 1,325,487 - Dshi_1275 0.28 -0.4 1,325,638 + Dshi_1275 0.42 -0.2 1,325,707 - Dshi_1275 0.48 -1.4 1,325,774 - Dshi_1275 0.54 -0.2 1,325,792 + Dshi_1275 0.56 +0.4 1,325,869 - Dshi_1275 0.62 +0.2 1,325,877 - Dshi_1275 0.63 -0.8 1,326,063 - Dshi_1275 0.80 -0.5 1,326,146 + Dshi_1275 0.87 -0.2 1,326,265 - -0.1 1,326,265 - +0.9 1,326,306 - +0.2 1,326,306 - -1.0 1,326,459 + Dshi_1276 0.21 -0.8 1,326,692 - Dshi_1276 0.50 +0.6 1,326,731 - Dshi_1276 0.55 -1.0 1,326,786 - Dshi_1276 0.62 -0.3 1,326,951 + Dshi_1276 0.83 -0.2 1,326,966 + Dshi_1276 0.85 +0.0 1,326,987 + Dshi_1276 0.87 -1.1 1,327,114 - Dshi_1277 0.16 +0.2 1,327,178 - Dshi_1277 0.43 -0.2 1,327,195 + Dshi_1277 0.50 +2.2 1,327,195 + Dshi_1277 0.50 +0.3 1,327,203 - Dshi_1277 0.53 +0.1 1,327,238 - Dshi_1277 0.67 +0.6 1,327,322 + -1.8 1,327,362 - +0.2 1,327,537 + Dshi_1278 0.19 -0.2 1,327,539 + Dshi_1278 0.19 +1.4 1,327,547 - Dshi_1278 0.20 -0.8 1,327,565 + Dshi_1278 0.22 +0.2 1,327,644 - Dshi_1278 0.28 +1.3 1,327,768 + Dshi_1278 0.39 +0.9 1,327,827 + Dshi_1278 0.44 +0.4 1,327,930 - Dshi_1278 0.53 -1.5 1,327,961 + Dshi_1278 0.55 -0.1 1,328,057 - Dshi_1278 0.64 -1.3 1,328,059 - Dshi_1278 0.64 +0.4
Or see this region's nucleotide sequence