Experiment: m.b. Chlorite 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0830 and Dshi_0831 overlap by 4 nucleotides Dshi_0831 and Dshi_0832 are separated by 0 nucleotides Dshi_0832 and Dshi_0833 are separated by 464 nucleotides
Dshi_0830: Dshi_0830 - Adenosine deaminase (EC 3.5.4.4) (from data) , at 838,252 to 839,247
_0830
Dshi_0831: Dshi_0831 - uracil phosphoribosyltransferase (RefSeq), at 839,244 to 839,876
_0831
Dshi_0832: Dshi_0832 - hypothetical protein (RefSeq), at 839,877 to 840,893
_0832
Dshi_0833: Dshi_0833 - AMP-dependent synthetase and ligase (RefSeq), at 841,358 to 842,983
_0833
Position (kb)
839
840
841 Strain fitness (log2 ratio)
-2
-1
0
1 at 839.002 kb on - strand, within Dshi_0830 at 839.154 kb on + strand at 839.247 kb on + strand at 839.368 kb on - strand, within Dshi_0831 at 839.408 kb on + strand, within Dshi_0831 at 839.408 kb on + strand, within Dshi_0831 at 839.632 kb on + strand, within Dshi_0831 at 839.646 kb on - strand, within Dshi_0831 at 839.774 kb on - strand, within Dshi_0831 at 839.819 kb on + strand at 839.935 kb on - strand at 839.969 kb on + strand at 840.002 kb on + strand, within Dshi_0832 at 840.213 kb on + strand, within Dshi_0832 at 840.353 kb on + strand, within Dshi_0832 at 840.434 kb on + strand, within Dshi_0832 at 840.594 kb on - strand, within Dshi_0832 at 840.688 kb on - strand, within Dshi_0832 at 840.854 kb on - strand at 840.878 kb on - strand at 840.893 kb on + strand at 840.895 kb on + strand at 841.015 kb on + strand at 841.043 kb on - strand at 841.043 kb on - strand at 841.153 kb on + strand at 841.161 kb on - strand at 841.319 kb on + strand at 841.342 kb on + strand at 841.413 kb on + strand at 841.498 kb on + strand at 841.578 kb on + strand, within Dshi_0833 at 841.583 kb on + strand, within Dshi_0833 at 841.591 kb on - strand, within Dshi_0833 at 841.609 kb on - strand, within Dshi_0833 at 841.757 kb on + strand, within Dshi_0833
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.5 mM remove 839,002 - Dshi_0830 0.75 +0.0 839,154 + +0.3 839,247 + -0.0 839,368 - Dshi_0831 0.20 -0.2 839,408 + Dshi_0831 0.26 +0.0 839,408 + Dshi_0831 0.26 +0.0 839,632 + Dshi_0831 0.61 +0.1 839,646 - Dshi_0831 0.64 +0.1 839,774 - Dshi_0831 0.84 -0.1 839,819 + +0.5 839,935 - -0.9 839,969 + -2.0 840,002 + Dshi_0832 0.12 +0.4 840,213 + Dshi_0832 0.33 -1.1 840,353 + Dshi_0832 0.47 -0.7 840,434 + Dshi_0832 0.55 -1.0 840,594 - Dshi_0832 0.71 -1.6 840,688 - Dshi_0832 0.80 -2.3 840,854 - -2.5 840,878 - -2.1 840,893 + -1.5 840,895 + +0.2 841,015 + +1.2 841,043 - -0.6 841,043 - -0.5 841,153 + +1.1 841,161 - +0.5 841,319 + -0.6 841,342 + +0.8 841,413 + -0.3 841,498 + -0.3 841,578 + Dshi_0833 0.14 -1.0 841,583 + Dshi_0833 0.14 +0.8 841,591 - Dshi_0833 0.14 +0.2 841,609 - Dshi_0833 0.15 -0.8 841,757 + Dshi_0833 0.25 -0.5
Or see this region's nucleotide sequence