Experiment: m.b. Chlorite 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0735 and Dshi_0736 overlap by 4 nucleotides Dshi_0736 and Dshi_0737 are separated by 63 nucleotides Dshi_0737 and Dshi_0738 are separated by 60 nucleotides Dshi_0738 and Dshi_0739 are separated by 16 nucleotides
Dshi_0735: Dshi_0735 - hypothetical protein (RefSeq), at 742,674 to 743,288
_0735
Dshi_0736: Dshi_0736 - GCN5-related N-acetyltransferase (RefSeq), at 743,285 to 743,770
_0736
Dshi_0737: Dshi_0737 - heat shock protein DnaJ domain protein (RefSeq), at 743,834 to 744,517
_0737
Dshi_0738: Dshi_0738 - hypothetical protein (RefSeq), at 744,578 to 744,895
_0738
Dshi_0739: Dshi_0739 - Ppx/GppA phosphatase (RefSeq), at 744,912 to 746,432
_0739
Position (kb) 743
744
745 Strain fitness (log2 ratio) -1
0
1 at 742.834 kb on + strand, within Dshi_0735 at 742.864 kb on - strand, within Dshi_0735 at 742.942 kb on + strand, within Dshi_0735 at 742.950 kb on - strand, within Dshi_0735 at 743.101 kb on - strand, within Dshi_0735 at 743.165 kb on - strand, within Dshi_0735 at 743.171 kb on + strand, within Dshi_0735 at 743.347 kb on - strand, within Dshi_0736 at 743.397 kb on + strand, within Dshi_0736 at 743.599 kb on - strand, within Dshi_0736 at 743.631 kb on + strand, within Dshi_0736 at 743.639 kb on - strand, within Dshi_0736 at 743.674 kb on - strand, within Dshi_0736 at 743.678 kb on + strand, within Dshi_0736 at 743.686 kb on - strand, within Dshi_0736 at 743.769 kb on + strand at 743.824 kb on + strand at 743.941 kb on - strand, within Dshi_0737 at 744.079 kb on - strand, within Dshi_0737 at 744.110 kb on + strand, within Dshi_0737 at 744.295 kb on + strand, within Dshi_0737 at 744.296 kb on + strand, within Dshi_0737 at 744.457 kb on + strand at 744.521 kb on - strand at 744.557 kb on - strand at 744.605 kb on - strand at 744.858 kb on - strand, within Dshi_0738 at 745.115 kb on - strand, within Dshi_0739 at 745.288 kb on - strand, within Dshi_0739 at 745.503 kb on + strand, within Dshi_0739
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.5 mM remove 742,834 + Dshi_0735 0.26 +1.1 742,864 - Dshi_0735 0.31 -0.7 742,942 + Dshi_0735 0.44 -0.6 742,950 - Dshi_0735 0.45 -0.2 743,101 - Dshi_0735 0.69 -0.2 743,165 - Dshi_0735 0.80 -0.9 743,171 + Dshi_0735 0.81 +0.7 743,347 - Dshi_0736 0.13 -1.6 743,397 + Dshi_0736 0.23 -0.2 743,599 - Dshi_0736 0.65 +0.6 743,631 + Dshi_0736 0.71 +0.3 743,639 - Dshi_0736 0.73 -0.2 743,674 - Dshi_0736 0.80 -0.0 743,678 + Dshi_0736 0.81 +0.2 743,686 - Dshi_0736 0.83 -0.1 743,769 + +0.2 743,824 + +0.9 743,941 - Dshi_0737 0.16 +0.6 744,079 - Dshi_0737 0.36 +1.1 744,110 + Dshi_0737 0.40 +1.1 744,295 + Dshi_0737 0.67 +0.9 744,296 + Dshi_0737 0.68 +0.5 744,457 + +0.8 744,521 - +0.1 744,557 - -0.5 744,605 - -0.4 744,858 - Dshi_0738 0.88 -0.8 745,115 - Dshi_0739 0.13 -1.4 745,288 - Dshi_0739 0.25 -1.3 745,503 + Dshi_0739 0.39 -1.1
Or see this region's nucleotide sequence