Experiment: MoLS4 with L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0430 and DVU0431 are separated by 12 nucleotides DVU0431 and DVU0432 are separated by 35 nucleotides DVU0432 and DVU0433 are separated by 12 nucleotides
DVU0430: DVU0430 - Ech hydrogenase, subunit EchE, putative (TIGR), at 484,788 to 485,864
DVU0430
DVU0431: DVU0431 - Ech hydrogenase, subunit EchD, putative (TIGR), at 485,877 to 486,269
DVU0431
DVU0432: DVU0432 - Ech hydrogenase, subunit EchC, putative (TIGR), at 486,305 to 486,778
DVU0432
DVU0433: DVU0433 - Ech hydrogenase, subunit EchB, putative (TIGR), at 486,791 to 487,639
DVU0433
Position (kb) 485
486
487 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 484.918 kb on + strand, within DVU0430 at 484.927 kb on - strand, within DVU0430 at 484.944 kb on - strand, within DVU0430 at 484.976 kb on + strand, within DVU0430 at 485.010 kb on + strand, within DVU0430 at 485.019 kb on - strand, within DVU0430 at 485.045 kb on + strand, within DVU0430 at 485.053 kb on - strand, within DVU0430 at 485.079 kb on + strand, within DVU0430 at 485.087 kb on + strand, within DVU0430 at 485.121 kb on - strand, within DVU0430 at 485.266 kb on + strand, within DVU0430 at 485.267 kb on - strand, within DVU0430 at 485.272 kb on - strand, within DVU0430 at 485.280 kb on - strand, within DVU0430 at 485.477 kb on + strand, within DVU0430 at 485.479 kb on + strand, within DVU0430 at 485.479 kb on + strand, within DVU0430 at 485.479 kb on + strand, within DVU0430 at 485.487 kb on - strand, within DVU0430 at 485.559 kb on + strand, within DVU0430 at 485.658 kb on - strand, within DVU0430 at 485.721 kb on + strand, within DVU0430 at 485.744 kb on + strand, within DVU0430 at 485.824 kb on + strand at 485.866 kb on + strand at 485.870 kb on - strand at 486.042 kb on - strand, within DVU0431 at 486.072 kb on - strand, within DVU0431 at 486.102 kb on + strand, within DVU0431 at 486.102 kb on + strand, within DVU0431 at 486.102 kb on + strand, within DVU0431 at 486.178 kb on + strand, within DVU0431 at 486.178 kb on + strand, within DVU0431 at 486.195 kb on - strand, within DVU0431 at 486.248 kb on + strand at 486.279 kb on - strand at 486.445 kb on + strand, within DVU0432 at 486.522 kb on + strand, within DVU0432 at 486.612 kb on + strand, within DVU0432 at 486.613 kb on + strand, within DVU0432 at 486.621 kb on - strand, within DVU0432 at 486.805 kb on + strand at 486.813 kb on - strand at 486.860 kb on - strand at 486.976 kb on + strand, within DVU0433 at 486.976 kb on + strand, within DVU0433 at 486.994 kb on + strand, within DVU0433 at 487.011 kb on + strand, within DVU0433 at 487.019 kb on - strand, within DVU0433 at 487.019 kb on - strand, within DVU0433 at 487.029 kb on - strand, within DVU0433 at 487.036 kb on - strand, within DVU0433 at 487.067 kb on + strand, within DVU0433 at 487.097 kb on + strand, within DVU0433 at 487.117 kb on + strand, within DVU0433 at 487.125 kb on - strand, within DVU0433 at 487.125 kb on - strand, within DVU0433 at 487.129 kb on + strand, within DVU0433 at 487.131 kb on + strand, within DVU0433 at 487.222 kb on - strand, within DVU0433 at 487.230 kb on - strand, within DVU0433
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glutamine (N) remove 484,918 + DVU0430 0.12 -0.1 484,927 - DVU0430 0.13 -0.7 484,944 - DVU0430 0.14 +0.6 484,976 + DVU0430 0.17 +0.1 485,010 + DVU0430 0.21 -0.2 485,019 - DVU0430 0.21 -0.4 485,045 + DVU0430 0.24 +0.7 485,053 - DVU0430 0.25 +0.6 485,079 + DVU0430 0.27 +0.1 485,087 + DVU0430 0.28 -3.3 485,121 - DVU0430 0.31 -0.5 485,266 + DVU0430 0.44 -2.8 485,267 - DVU0430 0.44 -0.5 485,272 - DVU0430 0.45 -3.6 485,280 - DVU0430 0.46 +0.1 485,477 + DVU0430 0.64 +0.2 485,479 + DVU0430 0.64 +0.2 485,479 + DVU0430 0.64 +0.7 485,479 + DVU0430 0.64 -0.3 485,487 - DVU0430 0.65 -4.5 485,559 + DVU0430 0.72 +0.8 485,658 - DVU0430 0.81 -0.2 485,721 + DVU0430 0.87 -0.3 485,744 + DVU0430 0.89 +0.6 485,824 + -0.6 485,866 + -0.4 485,870 - -0.0 486,042 - DVU0431 0.42 -0.5 486,072 - DVU0431 0.50 -5.1 486,102 + DVU0431 0.57 -3.2 486,102 + DVU0431 0.57 -2.5 486,102 + DVU0431 0.57 -3.0 486,178 + DVU0431 0.77 +0.2 486,178 + DVU0431 0.77 +0.0 486,195 - DVU0431 0.81 -0.0 486,248 + -0.2 486,279 - +0.1 486,445 + DVU0432 0.30 +0.3 486,522 + DVU0432 0.46 +0.5 486,612 + DVU0432 0.65 -0.6 486,613 + DVU0432 0.65 -0.2 486,621 - DVU0432 0.67 +0.1 486,805 + -0.1 486,813 - -0.8 486,860 - +0.0 486,976 + DVU0433 0.22 +0.7 486,976 + DVU0433 0.22 -0.4 486,994 + DVU0433 0.24 +0.5 487,011 + DVU0433 0.26 -3.4 487,019 - DVU0433 0.27 -0.5 487,019 - DVU0433 0.27 -0.2 487,029 - DVU0433 0.28 +0.3 487,036 - DVU0433 0.29 -0.0 487,067 + DVU0433 0.33 +0.5 487,097 + DVU0433 0.36 +0.2 487,117 + DVU0433 0.38 +0.4 487,125 - DVU0433 0.39 +1.1 487,125 - DVU0433 0.39 -0.4 487,129 + DVU0433 0.40 -0.3 487,131 + DVU0433 0.40 -0.4 487,222 - DVU0433 0.51 -0.2 487,230 - DVU0433 0.52 +0.8
Or see this region's nucleotide sequence