Experiment: MoLS4 with L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0270 and DVU0271 overlap by 4 nucleotides DVU0271 and DVU0272 are separated by 296 nucleotides DVU0272 and DVU0273 are separated by 36 nucleotides
DVU0270: DVU0270 - sensory box histidine kinase (TIGR), at 310,963 to 313,233
DVU0270
DVU0271: DVU0271 - response regulator (TIGR), at 313,230 to 314,720
DVU0271
DVU0272: DVU0272 - hypothetical protein (TIGR), at 315,017 to 315,112
DVU0272
DVU0273: DVU0273 - conserved hypothetical protein (TIGR), at 315,149 to 316,666
DVU0273
Position (kb)
313
314
315 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 312.320 kb on + strand, within DVU0270 at 312.345 kb on - strand, within DVU0270 at 312.357 kb on + strand, within DVU0270 at 312.420 kb on + strand, within DVU0270 at 312.441 kb on + strand, within DVU0270 at 312.505 kb on + strand, within DVU0270 at 312.577 kb on - strand, within DVU0270 at 312.591 kb on + strand, within DVU0270 at 312.599 kb on - strand, within DVU0270 at 312.693 kb on + strand, within DVU0270 at 312.698 kb on + strand, within DVU0270 at 312.698 kb on + strand, within DVU0270 at 312.701 kb on - strand, within DVU0270 at 312.786 kb on - strand, within DVU0270 at 312.849 kb on + strand, within DVU0270 at 312.969 kb on + strand, within DVU0270 at 312.969 kb on + strand, within DVU0270 at 313.038 kb on - strand at 313.057 kb on - strand at 313.108 kb on + strand at 313.108 kb on + strand at 313.108 kb on + strand at 313.108 kb on + strand at 313.109 kb on + strand at 313.116 kb on - strand at 313.116 kb on - strand at 313.116 kb on - strand at 313.137 kb on + strand at 313.237 kb on + strand at 313.245 kb on - strand at 313.345 kb on + strand at 313.345 kb on + strand at 313.417 kb on - strand, within DVU0271 at 313.422 kb on - strand, within DVU0271 at 313.453 kb on + strand, within DVU0271 at 313.461 kb on - strand, within DVU0271 at 313.543 kb on - strand, within DVU0271 at 313.543 kb on - strand, within DVU0271 at 313.582 kb on + strand, within DVU0271 at 313.616 kb on + strand, within DVU0271 at 313.639 kb on - strand, within DVU0271 at 313.671 kb on - strand, within DVU0271 at 313.801 kb on + strand, within DVU0271 at 313.818 kb on + strand, within DVU0271 at 313.833 kb on + strand, within DVU0271 at 313.841 kb on - strand, within DVU0271 at 313.858 kb on + strand, within DVU0271 at 313.876 kb on - strand, within DVU0271 at 313.883 kb on + strand, within DVU0271 at 313.916 kb on + strand, within DVU0271 at 313.982 kb on + strand, within DVU0271 at 313.996 kb on + strand, within DVU0271 at 313.996 kb on + strand, within DVU0271 at 313.996 kb on + strand, within DVU0271 at 313.996 kb on + strand, within DVU0271 at 314.004 kb on - strand, within DVU0271 at 314.061 kb on - strand, within DVU0271 at 314.076 kb on + strand, within DVU0271 at 314.102 kb on - strand, within DVU0271 at 314.173 kb on - strand, within DVU0271 at 314.173 kb on - strand, within DVU0271 at 314.212 kb on + strand, within DVU0271 at 314.304 kb on + strand, within DVU0271 at 314.310 kb on - strand, within DVU0271 at 314.366 kb on - strand, within DVU0271 at 314.452 kb on - strand, within DVU0271 at 314.467 kb on + strand, within DVU0271 at 314.499 kb on + strand, within DVU0271 at 314.562 kb on + strand, within DVU0271 at 314.562 kb on + strand, within DVU0271 at 314.570 kb on - strand, within DVU0271 at 314.572 kb on - strand at 314.640 kb on - strand at 314.680 kb on + strand at 314.714 kb on + strand at 314.714 kb on + strand at 314.714 kb on + strand at 314.714 kb on + strand at 314.714 kb on + strand at 314.714 kb on + strand at 314.722 kb on - strand at 314.722 kb on - strand at 314.722 kb on - strand at 314.722 kb on - strand at 314.722 kb on - strand at 314.722 kb on - strand at 314.722 kb on - strand at 314.722 kb on - strand at 314.722 kb on - strand at 314.722 kb on - strand at 314.722 kb on - strand at 314.732 kb on - strand at 314.952 kb on - strand at 315.003 kb on + strand at 315.027 kb on - strand, within DVU0272 at 315.047 kb on + strand, within DVU0272 at 315.050 kb on - strand, within DVU0272 at 315.050 kb on - strand, within DVU0272 at 315.050 kb on - strand, within DVU0272 at 315.055 kb on - strand, within DVU0272 at 315.057 kb on - strand, within DVU0272 at 315.094 kb on + strand, within DVU0272 at 315.151 kb on + strand at 315.239 kb on - strand at 315.266 kb on + strand at 315.266 kb on + strand at 315.274 kb on - strand at 315.446 kb on + strand, within DVU0273 at 315.543 kb on + strand, within DVU0273 at 315.585 kb on + strand, within DVU0273 at 315.585 kb on + strand, within DVU0273 at 315.593 kb on - strand, within DVU0273 at 315.632 kb on + strand, within DVU0273 at 315.659 kb on - strand, within DVU0273 at 315.691 kb on + strand, within DVU0273 at 315.699 kb on - strand, within DVU0273 at 315.699 kb on - strand, within DVU0273 at 315.699 kb on - strand, within DVU0273 at 315.699 kb on - strand, within DVU0273
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glutamine (N) remove 312,320 + DVU0270 0.60 -0.2 312,345 - DVU0270 0.61 -0.3 312,357 + DVU0270 0.61 -3.0 312,420 + DVU0270 0.64 -0.0 312,441 + DVU0270 0.65 -0.7 312,505 + DVU0270 0.68 +0.6 312,577 - DVU0270 0.71 -0.5 312,591 + DVU0270 0.72 +0.4 312,599 - DVU0270 0.72 -0.1 312,693 + DVU0270 0.76 +0.1 312,698 + DVU0270 0.76 -0.8 312,698 + DVU0270 0.76 -0.1 312,701 - DVU0270 0.77 -0.5 312,786 - DVU0270 0.80 -0.2 312,849 + DVU0270 0.83 -0.0 312,969 + DVU0270 0.88 -0.8 312,969 + DVU0270 0.88 -1.8 313,038 - -1.8 313,057 - -0.3 313,108 + -0.8 313,108 + -3.1 313,108 + -0.9 313,108 + -0.5 313,109 + -0.5 313,116 - -0.6 313,116 - -3.0 313,116 - -3.0 313,137 + -2.9 313,237 + -3.5 313,245 - -0.2 313,345 + -4.3 313,345 + -2.4 313,417 - DVU0271 0.13 -3.1 313,422 - DVU0271 0.13 -0.2 313,453 + DVU0271 0.15 +0.1 313,461 - DVU0271 0.15 -2.7 313,543 - DVU0271 0.21 -0.2 313,543 - DVU0271 0.21 -0.5 313,582 + DVU0271 0.24 -0.4 313,616 + DVU0271 0.26 -0.3 313,639 - DVU0271 0.27 -0.6 313,671 - DVU0271 0.30 -0.3 313,801 + DVU0271 0.38 -1.5 313,818 + DVU0271 0.39 -0.5 313,833 + DVU0271 0.40 -1.0 313,841 - DVU0271 0.41 -0.0 313,858 + DVU0271 0.42 -3.7 313,876 - DVU0271 0.43 -3.1 313,883 + DVU0271 0.44 -0.2 313,916 + DVU0271 0.46 -1.1 313,982 + DVU0271 0.50 -0.5 313,996 + DVU0271 0.51 -3.9 313,996 + DVU0271 0.51 -0.1 313,996 + DVU0271 0.51 +1.4 313,996 + DVU0271 0.51 -0.2 314,004 - DVU0271 0.52 +0.1 314,061 - DVU0271 0.56 -3.5 314,076 + DVU0271 0.57 -0.6 314,102 - DVU0271 0.58 -0.2 314,173 - DVU0271 0.63 -1.2 314,173 - DVU0271 0.63 -0.0 314,212 + DVU0271 0.66 +0.1 314,304 + DVU0271 0.72 +0.2 314,310 - DVU0271 0.72 -1.5 314,366 - DVU0271 0.76 -1.5 314,452 - DVU0271 0.82 -0.4 314,467 + DVU0271 0.83 -0.4 314,499 + DVU0271 0.85 +0.7 314,562 + DVU0271 0.89 -1.5 314,562 + DVU0271 0.89 -0.5 314,570 - DVU0271 0.90 -0.0 314,572 - +0.1 314,640 - -0.7 314,680 + -0.5 314,714 + +0.6 314,714 + -0.8 314,714 + -0.7 314,714 + +0.5 314,714 + -0.4 314,714 + +0.1 314,722 - -0.3 314,722 - -0.9 314,722 - +0.8 314,722 - +0.8 314,722 - -0.2 314,722 - -0.7 314,722 - +1.1 314,722 - -0.5 314,722 - -0.0 314,722 - -0.8 314,722 - -2.7 314,732 - -0.7 314,952 - -0.1 315,003 + -0.2 315,027 - DVU0272 0.10 -0.5 315,047 + DVU0272 0.31 +0.7 315,050 - DVU0272 0.34 -0.3 315,050 - DVU0272 0.34 +0.0 315,050 - DVU0272 0.34 +0.1 315,055 - DVU0272 0.40 +0.2 315,057 - DVU0272 0.42 -1.1 315,094 + DVU0272 0.80 -0.9 315,151 + -0.6 315,239 - -0.4 315,266 + +0.1 315,266 + +1.3 315,274 - -0.3 315,446 + DVU0273 0.20 -0.4 315,543 + DVU0273 0.26 -3.2 315,585 + DVU0273 0.29 -0.9 315,585 + DVU0273 0.29 -3.1 315,593 - DVU0273 0.29 +0.5 315,632 + DVU0273 0.32 -2.8 315,659 - DVU0273 0.34 -0.1 315,691 + DVU0273 0.36 +0.9 315,699 - DVU0273 0.36 -1.1 315,699 - DVU0273 0.36 -0.2 315,699 - DVU0273 0.36 +0.7 315,699 - DVU0273 0.36 -0.5
Or see this region's nucleotide sequence