Experiment: MoLS4 with L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0094 and potD-1 are separated by 140 nucleotides potD-1 and potC are separated by 1 nucleotides potC and potB are separated by 2 nucleotides
DVU0094: DVU0094 - methyl-accepting chemotaxis protein (TIGR), at 123,374 to 125,536
DVU0094
DVU0095: potD-1 - polyamine ABC transporter, periplasmic polyamine-binding protein (TIGR), at 125,677 to 126,714
potD-1
DVU0096: potC - polyamine ABC transporter, permease protein (TIGR), at 126,716 to 127,489
potC
DVU0097: potB - polyamine ABC transporter, permease protein (TIGR), at 127,492 to 128,379
potB
Position (kb)
125
126
127 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 124.682 kb on + strand, within DVU0094 at 124.690 kb on - strand, within DVU0094 at 124.744 kb on - strand, within DVU0094 at 124.758 kb on + strand, within DVU0094 at 124.935 kb on + strand, within DVU0094 at 124.939 kb on - strand, within DVU0094 at 124.955 kb on + strand, within DVU0094 at 124.963 kb on - strand, within DVU0094 at 124.974 kb on - strand, within DVU0094 at 125.202 kb on + strand, within DVU0094 at 125.202 kb on + strand, within DVU0094 at 125.210 kb on - strand, within DVU0094 at 125.220 kb on - strand, within DVU0094 at 125.227 kb on - strand, within DVU0094 at 125.229 kb on + strand, within DVU0094 at 125.229 kb on + strand, within DVU0094 at 125.271 kb on - strand, within DVU0094 at 125.289 kb on + strand, within DVU0094 at 125.297 kb on - strand, within DVU0094 at 125.297 kb on - strand, within DVU0094 at 125.297 kb on - strand, within DVU0094 at 125.345 kb on - strand at 125.345 kb on - strand at 125.531 kb on + strand at 125.531 kb on + strand at 125.531 kb on + strand at 125.531 kb on + strand at 125.531 kb on + strand at 125.531 kb on + strand at 125.539 kb on - strand at 125.539 kb on - strand at 125.539 kb on - strand at 125.539 kb on - strand at 125.689 kb on + strand at 125.697 kb on - strand at 125.707 kb on - strand at 125.869 kb on - strand, within potD-1 at 125.905 kb on + strand, within potD-1 at 126.005 kb on - strand, within potD-1 at 126.050 kb on + strand, within potD-1 at 126.058 kb on - strand, within potD-1 at 126.068 kb on + strand, within potD-1 at 126.236 kb on + strand, within potD-1 at 126.239 kb on - strand, within potD-1 at 126.242 kb on + strand, within potD-1 at 126.244 kb on - strand, within potD-1 at 126.292 kb on + strand, within potD-1 at 126.300 kb on - strand, within potD-1 at 126.315 kb on - strand, within potD-1 at 126.326 kb on - strand, within potD-1 at 126.342 kb on - strand, within potD-1 at 126.378 kb on - strand, within potD-1 at 126.390 kb on + strand, within potD-1 at 126.414 kb on + strand, within potD-1 at 126.490 kb on + strand, within potD-1 at 126.553 kb on + strand, within potD-1 at 126.561 kb on - strand, within potD-1 at 126.592 kb on + strand, within potD-1 at 126.592 kb on + strand, within potD-1 at 126.600 kb on - strand, within potD-1 at 126.633 kb on - strand at 126.671 kb on + strand at 126.679 kb on - strand at 126.679 kb on - strand at 126.731 kb on - strand at 126.734 kb on + strand at 126.754 kb on + strand at 126.760 kb on + strand at 126.884 kb on + strand, within potC at 126.889 kb on - strand, within potC at 126.954 kb on - strand, within potC at 126.999 kb on - strand, within potC at 127.008 kb on + strand, within potC at 127.027 kb on - strand, within potC at 127.149 kb on + strand, within potC at 127.171 kb on + strand, within potC at 127.187 kb on - strand, within potC at 127.194 kb on + strand, within potC at 127.199 kb on + strand, within potC at 127.199 kb on + strand, within potC at 127.199 kb on + strand, within potC at 127.207 kb on - strand, within potC at 127.207 kb on - strand, within potC at 127.207 kb on - strand, within potC at 127.207 kb on - strand, within potC at 127.304 kb on + strand, within potC at 127.312 kb on - strand, within potC at 127.387 kb on + strand, within potC at 127.395 kb on - strand, within potC at 127.417 kb on + strand at 127.425 kb on - strand at 127.426 kb on - strand at 127.450 kb on - strand at 127.451 kb on - strand at 127.453 kb on + strand at 127.461 kb on - strand at 127.520 kb on - strand at 127.539 kb on - strand at 127.574 kb on + strand at 127.582 kb on - strand, within potB
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glutamine (N) remove 124,682 + DVU0094 0.60 +0.3 124,690 - DVU0094 0.61 -1.0 124,744 - DVU0094 0.63 -2.1 124,758 + DVU0094 0.64 +0.2 124,935 + DVU0094 0.72 -0.4 124,939 - DVU0094 0.72 +0.8 124,955 + DVU0094 0.73 +0.1 124,963 - DVU0094 0.73 +1.0 124,974 - DVU0094 0.74 +0.6 125,202 + DVU0094 0.85 +0.1 125,202 + DVU0094 0.85 -0.8 125,210 - DVU0094 0.85 -0.2 125,220 - DVU0094 0.85 -2.3 125,227 - DVU0094 0.86 -0.5 125,229 + DVU0094 0.86 +0.1 125,229 + DVU0094 0.86 -4.1 125,271 - DVU0094 0.88 -0.3 125,289 + DVU0094 0.89 -3.8 125,297 - DVU0094 0.89 -1.2 125,297 - DVU0094 0.89 -0.2 125,297 - DVU0094 0.89 +0.6 125,345 - -0.1 125,345 - +0.2 125,531 + -0.0 125,531 + +0.2 125,531 + -1.1 125,531 + -0.0 125,531 + +0.4 125,531 + +0.4 125,539 - +1.1 125,539 - +0.9 125,539 - +0.3 125,539 - -0.5 125,689 + -0.4 125,697 - +0.2 125,707 - +0.2 125,869 - potD-1 DVU0095 0.18 -0.4 125,905 + potD-1 DVU0095 0.22 -0.1 126,005 - potD-1 DVU0095 0.32 -0.1 126,050 + potD-1 DVU0095 0.36 -3.9 126,058 - potD-1 DVU0095 0.37 +1.3 126,068 + potD-1 DVU0095 0.38 -2.8 126,236 + potD-1 DVU0095 0.54 -2.2 126,239 - potD-1 DVU0095 0.54 -2.0 126,242 + potD-1 DVU0095 0.54 -3.2 126,244 - potD-1 DVU0095 0.55 -0.6 126,292 + potD-1 DVU0095 0.59 -0.4 126,300 - potD-1 DVU0095 0.60 -0.7 126,315 - potD-1 DVU0095 0.61 +0.3 126,326 - potD-1 DVU0095 0.63 +0.3 126,342 - potD-1 DVU0095 0.64 -0.5 126,378 - potD-1 DVU0095 0.68 +0.4 126,390 + potD-1 DVU0095 0.69 -0.7 126,414 + potD-1 DVU0095 0.71 -1.5 126,490 + potD-1 DVU0095 0.78 -0.4 126,553 + potD-1 DVU0095 0.84 -0.2 126,561 - potD-1 DVU0095 0.85 +0.0 126,592 + potD-1 DVU0095 0.88 -0.4 126,592 + potD-1 DVU0095 0.88 -0.2 126,600 - potD-1 DVU0095 0.89 -1.0 126,633 - -0.1 126,671 + +0.1 126,679 - -0.2 126,679 - -0.3 126,731 - +0.5 126,734 + -0.2 126,754 + -0.4 126,760 + +0.9 126,884 + potC DVU0096 0.22 +0.3 126,889 - potC DVU0096 0.22 +0.9 126,954 - potC DVU0096 0.31 +0.1 126,999 - potC DVU0096 0.37 -0.2 127,008 + potC DVU0096 0.38 -0.1 127,027 - potC DVU0096 0.40 -0.4 127,149 + potC DVU0096 0.56 -4.2 127,171 + potC DVU0096 0.59 +1.8 127,187 - potC DVU0096 0.61 +0.3 127,194 + potC DVU0096 0.62 -0.4 127,199 + potC DVU0096 0.62 +0.5 127,199 + potC DVU0096 0.62 -5.1 127,199 + potC DVU0096 0.62 +1.0 127,207 - potC DVU0096 0.63 -0.3 127,207 - potC DVU0096 0.63 -0.4 127,207 - potC DVU0096 0.63 -0.2 127,207 - potC DVU0096 0.63 -0.1 127,304 + potC DVU0096 0.76 -3.1 127,312 - potC DVU0096 0.77 -0.3 127,387 + potC DVU0096 0.87 -1.4 127,395 - potC DVU0096 0.88 +0.1 127,417 + +0.2 127,425 - -3.3 127,426 - -3.6 127,450 - -0.3 127,451 - -0.2 127,453 + -3.1 127,461 - -0.1 127,520 - +1.8 127,539 - +1.4 127,574 + -0.6 127,582 - potB DVU0097 0.10 -0.6
Or see this region's nucleotide sequence