Experiment: MoLS4 with L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU3101 and DVU3102 are separated by 105 nucleotides DVU3102 and DVU3103 are separated by 76 nucleotides
DVU3101: DVU3101 - tonB protein, putative (TIGR), at 3,240,930 to 3,241,955
DVU3101
DVU3102: DVU3102 - hypothetical protein (TIGR), at 3,242,061 to 3,242,648
DVU3102
DVU3103: DVU3103 - tolB protein, putative (TIGR), at 3,242,725 to 3,244,095
DVU3103
Position (kb)
3242
3243 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3241.950 kb on + strand at 3241.950 kb on + strand at 3241.950 kb on + strand at 3242.037 kb on + strand at 3242.090 kb on - strand at 3242.131 kb on - strand, within DVU3102 at 3242.135 kb on + strand, within DVU3102 at 3242.172 kb on + strand, within DVU3102 at 3242.172 kb on + strand, within DVU3102 at 3242.180 kb on - strand, within DVU3102 at 3242.180 kb on - strand, within DVU3102 at 3242.180 kb on - strand, within DVU3102 at 3242.180 kb on - strand, within DVU3102 at 3242.215 kb on - strand, within DVU3102 at 3242.223 kb on - strand, within DVU3102 at 3242.241 kb on + strand, within DVU3102 at 3242.249 kb on - strand, within DVU3102 at 3242.271 kb on + strand, within DVU3102 at 3242.375 kb on + strand, within DVU3102 at 3242.375 kb on + strand, within DVU3102 at 3242.387 kb on + strand, within DVU3102 at 3242.387 kb on + strand, within DVU3102 at 3242.395 kb on - strand, within DVU3102 at 3242.410 kb on - strand, within DVU3102 at 3242.410 kb on - strand, within DVU3102 at 3242.437 kb on + strand, within DVU3102 at 3242.439 kb on + strand, within DVU3102 at 3242.623 kb on + strand at 3242.623 kb on + strand at 3242.629 kb on - strand at 3242.629 kb on - strand at 3242.640 kb on + strand at 3242.757 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glutamine (N) remove 3,241,950 + +0.3 3,241,950 + +0.6 3,241,950 + -1.1 3,242,037 + +0.0 3,242,090 - +1.7 3,242,131 - DVU3102 0.12 -0.8 3,242,135 + DVU3102 0.13 -0.4 3,242,172 + DVU3102 0.19 -1.5 3,242,172 + DVU3102 0.19 -0.1 3,242,180 - DVU3102 0.20 +0.4 3,242,180 - DVU3102 0.20 -3.2 3,242,180 - DVU3102 0.20 +0.3 3,242,180 - DVU3102 0.20 +0.2 3,242,215 - DVU3102 0.26 +0.1 3,242,223 - DVU3102 0.28 -0.2 3,242,241 + DVU3102 0.31 +0.2 3,242,249 - DVU3102 0.32 -0.2 3,242,271 + DVU3102 0.36 -2.0 3,242,375 + DVU3102 0.53 -3.2 3,242,375 + DVU3102 0.53 -2.9 3,242,387 + DVU3102 0.55 -0.1 3,242,387 + DVU3102 0.55 -0.4 3,242,395 - DVU3102 0.57 -0.8 3,242,410 - DVU3102 0.59 -0.1 3,242,410 - DVU3102 0.59 +0.3 3,242,437 + DVU3102 0.64 -0.1 3,242,439 + DVU3102 0.64 -2.7 3,242,623 + +0.4 3,242,623 + +0.5 3,242,629 - +0.9 3,242,629 - -0.1 3,242,640 + -0.1 3,242,757 + -0.1
Or see this region's nucleotide sequence