Experiment: MoLS4 with L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt nikR and DVU2892 are separated by 4 nucleotides DVU2892 and flgG are separated by 47 nucleotides flgG and flrA are separated by 277 nucleotides
DVU2891: nikR - nickel responsive regulator (TIGR), at 2,988,755 to 2,989,174
nikR
DVU2892: DVU2892 - conserved hypothetical protein (TIGR), at 2,989,179 to 2,989,979
DVU2892
DVU2893: flgG - flagellar basal-body rod protein, putative (TIGR), at 2,990,027 to 2,990,404
flgG
DVU2894: flrA - sigma-54 dependent transcriptional regulator (TIGR), at 2,990,682 to 2,991,731
flrA
Position (kb)
2990
2991 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2989.055 kb on - strand, within nikR at 2989.104 kb on + strand, within nikR at 2989.113 kb on - strand, within nikR at 2989.140 kb on - strand at 2989.162 kb on + strand at 2989.162 kb on + strand at 2990.002 kb on - strand at 2990.060 kb on - strand at 2990.104 kb on + strand, within flgG at 2990.219 kb on + strand, within flgG at 2990.227 kb on - strand, within flgG at 2990.243 kb on + strand, within flgG at 2990.284 kb on + strand, within flgG at 2990.333 kb on + strand, within flgG at 2990.338 kb on + strand, within flgG at 2990.423 kb on + strand at 2990.446 kb on + strand at 2990.497 kb on + strand at 2990.498 kb on + strand at 2990.630 kb on + strand at 2990.695 kb on + strand at 2990.716 kb on + strand at 2990.778 kb on - strand at 2990.811 kb on + strand, within flrA at 2990.819 kb on - strand, within flrA at 2990.898 kb on + strand, within flrA at 2991.013 kb on + strand, within flrA at 2991.059 kb on + strand, within flrA at 2991.176 kb on + strand, within flrA at 2991.199 kb on + strand, within flrA at 2991.207 kb on - strand, within flrA at 2991.269 kb on + strand, within flrA at 2991.277 kb on + strand, within flrA at 2991.279 kb on + strand, within flrA
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glutamine (N) remove 2,989,055 - nikR DVU2891 0.71 -0.3 2,989,104 + nikR DVU2891 0.83 -3.1 2,989,113 - nikR DVU2891 0.85 +0.6 2,989,140 - +0.6 2,989,162 + +0.2 2,989,162 + -1.8 2,990,002 - -0.3 2,990,060 - +0.1 2,990,104 + flgG DVU2893 0.20 +0.1 2,990,219 + flgG DVU2893 0.51 +0.6 2,990,227 - flgG DVU2893 0.53 -0.2 2,990,243 + flgG DVU2893 0.57 -1.0 2,990,284 + flgG DVU2893 0.68 +0.7 2,990,333 + flgG DVU2893 0.81 +0.2 2,990,338 + flgG DVU2893 0.82 -3.1 2,990,423 + +0.2 2,990,446 + -2.7 2,990,497 + +0.5 2,990,498 + -0.6 2,990,630 + -0.5 2,990,695 + +0.3 2,990,716 + +1.1 2,990,778 - +0.4 2,990,811 + flrA DVU2894 0.12 +0.4 2,990,819 - flrA DVU2894 0.13 +0.1 2,990,898 + flrA DVU2894 0.21 +1.7 2,991,013 + flrA DVU2894 0.32 +0.4 2,991,059 + flrA DVU2894 0.36 +0.3 2,991,176 + flrA DVU2894 0.47 +0.3 2,991,199 + flrA DVU2894 0.49 -3.0 2,991,207 - flrA DVU2894 0.50 -0.3 2,991,269 + flrA DVU2894 0.56 -2.5 2,991,277 + flrA DVU2894 0.57 +0.8 2,991,279 + flrA DVU2894 0.57 +0.0
Or see this region's nucleotide sequence