Experiment: MoLS4 with L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2879 and DVU2880 are separated by 57 nucleotides DVU2880 and DVU2881 are separated by 80 nucleotides DVU2881 and tRNA-Arg are separated by 507 nucleotides
DVU2879: DVU2879 - conserved hypothetical protein (TIGR), at 2,973,642 to 2,975,198
DVU2879
DVU2880: DVU2880 - hypothetical protein (TIGR), at 2,975,256 to 2,975,384
DVU2880
DVU2881: DVU2881 - phage/plasmid primase, P4 family (TIGR), at 2,975,465 to 2,977,150
DVU2881
DVU_tRNA-Arg-5: tRNA-Arg - tRNA with anticodon TCT for Arg (VIMSS-AUTO), at 2,977,658 to 2,977,734
tRNA-Arg
Position (kb)
2975
2976
2977
2978 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2974.735 kb on + strand, within DVU2879 at 2974.761 kb on + strand, within DVU2879 at 2974.769 kb on - strand, within DVU2879 at 2974.807 kb on + strand, within DVU2879 at 2974.807 kb on + strand, within DVU2879 at 2974.807 kb on + strand, within DVU2879 at 2975.095 kb on + strand at 2975.095 kb on + strand at 2975.102 kb on + strand at 2975.130 kb on - strand at 2975.134 kb on - strand at 2975.154 kb on - strand at 2975.372 kb on + strand at 2975.503 kb on - strand at 2975.511 kb on + strand at 2976.325 kb on - strand, within DVU2881 at 2976.325 kb on - strand, within DVU2881 at 2976.456 kb on + strand, within DVU2881 at 2976.896 kb on + strand, within DVU2881 at 2977.160 kb on + strand at 2977.189 kb on - strand at 2977.321 kb on + strand at 2977.336 kb on + strand at 2977.430 kb on + strand at 2977.481 kb on - strand at 2977.511 kb on + strand at 2977.564 kb on - strand at 2977.771 kb on + strand at 2977.791 kb on + strand at 2977.801 kb on - strand at 2977.827 kb on - strand at 2977.854 kb on + strand at 2977.928 kb on + strand at 2977.943 kb on - strand at 2977.965 kb on + strand at 2978.054 kb on + strand at 2978.070 kb on - strand at 2978.098 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glutamine (N) remove 2,974,735 + DVU2879 0.70 +1.2 2,974,761 + DVU2879 0.72 -0.3 2,974,769 - DVU2879 0.72 +0.3 2,974,807 + DVU2879 0.75 +0.2 2,974,807 + DVU2879 0.75 +0.1 2,974,807 + DVU2879 0.75 -3.2 2,975,095 + +0.8 2,975,095 + +1.5 2,975,102 + -0.3 2,975,130 - -0.2 2,975,134 - -0.0 2,975,154 - -2.9 2,975,372 + +0.3 2,975,503 - +0.4 2,975,511 + +0.8 2,976,325 - DVU2881 0.51 +0.3 2,976,325 - DVU2881 0.51 -3.1 2,976,456 + DVU2881 0.59 -1.2 2,976,896 + DVU2881 0.85 -1.8 2,977,160 + +0.3 2,977,189 - -0.3 2,977,321 + +0.2 2,977,336 + +0.1 2,977,430 + -0.3 2,977,481 - +0.2 2,977,511 + -3.4 2,977,564 - +0.3 2,977,771 + -3.0 2,977,791 + -0.2 2,977,801 - -0.0 2,977,827 - -0.0 2,977,854 + +0.7 2,977,928 + +0.1 2,977,943 - +0.3 2,977,965 + -0.2 2,978,054 + +0.1 2,978,070 - -0.4 2,978,098 - -2.9
Or see this region's nucleotide sequence