Experiment: MoLS4 with L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt nikK and DVU2770 are separated by 109 nucleotides DVU2770 and DVU2771 are separated by 11 nucleotides
DVU2769: nikK - additional component of nickel ABC transporter (Dmitry Rodionov), at 2,876,621 to 2,877,403
nikK
DVU2770: DVU2770 - response regulator (TIGR), at 2,877,513 to 2,877,911
DVU2770
DVU2771: DVU2771 - conserved hypothetical protein (TIGR), at 2,877,923 to 2,878,888
DVU2771
Position (kb)
2877
2878 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2876.617 kb on - strand at 2876.706 kb on - strand, within nikK at 2876.733 kb on - strand, within nikK at 2876.747 kb on + strand, within nikK at 2876.780 kb on + strand, within nikK at 2876.781 kb on + strand, within nikK at 2876.884 kb on + strand, within nikK at 2876.969 kb on + strand, within nikK at 2877.138 kb on - strand, within nikK at 2877.175 kb on + strand, within nikK at 2877.206 kb on + strand, within nikK at 2877.213 kb on + strand, within nikK at 2877.315 kb on + strand, within nikK at 2877.323 kb on - strand, within nikK at 2877.348 kb on - strand at 2877.509 kb on - strand at 2877.597 kb on + strand, within DVU2770 at 2877.626 kb on + strand, within DVU2770 at 2877.781 kb on - strand, within DVU2770 at 2877.848 kb on + strand, within DVU2770 at 2877.856 kb on - strand, within DVU2770 at 2877.905 kb on + strand at 2877.905 kb on + strand at 2877.907 kb on + strand at 2877.922 kb on + strand at 2877.962 kb on - strand at 2878.100 kb on + strand, within DVU2771 at 2878.408 kb on - strand, within DVU2771 at 2878.496 kb on - strand, within DVU2771 at 2878.511 kb on - strand, within DVU2771 at 2878.511 kb on - strand, within DVU2771 at 2878.559 kb on + strand, within DVU2771 at 2878.604 kb on - strand, within DVU2771 at 2878.670 kb on + strand, within DVU2771 at 2878.683 kb on + strand, within DVU2771 at 2878.699 kb on - strand, within DVU2771 at 2878.787 kb on - strand, within DVU2771 at 2878.812 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glutamine (N) remove 2,876,617 - -0.8 2,876,706 - nikK DVU2769 0.11 -0.0 2,876,733 - nikK DVU2769 0.14 -2.9 2,876,747 + nikK DVU2769 0.16 -0.3 2,876,780 + nikK DVU2769 0.20 -0.4 2,876,781 + nikK DVU2769 0.20 -0.5 2,876,884 + nikK DVU2769 0.34 -2.9 2,876,969 + nikK DVU2769 0.44 -1.0 2,877,138 - nikK DVU2769 0.66 -0.9 2,877,175 + nikK DVU2769 0.71 -0.1 2,877,206 + nikK DVU2769 0.75 -3.2 2,877,213 + nikK DVU2769 0.76 +0.0 2,877,315 + nikK DVU2769 0.89 +0.2 2,877,323 - nikK DVU2769 0.90 -0.9 2,877,348 - -0.1 2,877,509 - -0.8 2,877,597 + DVU2770 0.21 -0.9 2,877,626 + DVU2770 0.28 -0.6 2,877,781 - DVU2770 0.67 +0.3 2,877,848 + DVU2770 0.84 -0.1 2,877,856 - DVU2770 0.86 -3.2 2,877,905 + -0.1 2,877,905 + -1.2 2,877,907 + -0.3 2,877,922 + -0.3 2,877,962 - +0.1 2,878,100 + DVU2771 0.18 -5.0 2,878,408 - DVU2771 0.50 -1.0 2,878,496 - DVU2771 0.59 +0.1 2,878,511 - DVU2771 0.61 +0.2 2,878,511 - DVU2771 0.61 -0.3 2,878,559 + DVU2771 0.66 -0.4 2,878,604 - DVU2771 0.70 -1.1 2,878,670 + DVU2771 0.77 -0.1 2,878,683 + DVU2771 0.79 -0.7 2,878,699 - DVU2771 0.80 +0.1 2,878,787 - DVU2771 0.89 -0.3 2,878,812 + +0.1
Or see this region's nucleotide sequence