Experiment: MoLS4 with L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2125 and DVU2126 are separated by 188 nucleotides DVU2126 and DVU2127 are separated by 10 nucleotides
DVU2125: DVU2125 - TPR domain protein (TIGR), at 2,220,892 to 2,222,007
DVU2125
DVU2126: DVU2126 - hypothetical protein (TIGR), at 2,222,196 to 2,222,585
DVU2126
DVU2127: DVU2127 - von Willebrand factor type A domain protein (TIGR), at 2,222,596 to 2,223,858
DVU2127
Position (kb)
2222
2223 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2221.354 kb on + strand, within DVU2125 at 2221.354 kb on + strand, within DVU2125 at 2221.354 kb on + strand, within DVU2125 at 2221.362 kb on - strand, within DVU2125 at 2221.471 kb on + strand, within DVU2125 at 2221.559 kb on - strand, within DVU2125 at 2221.565 kb on + strand, within DVU2125 at 2221.578 kb on - strand, within DVU2125 at 2221.639 kb on - strand, within DVU2125 at 2221.827 kb on + strand, within DVU2125 at 2221.827 kb on + strand, within DVU2125 at 2221.936 kb on - strand at 2221.984 kb on - strand at 2222.004 kb on + strand at 2222.222 kb on - strand at 2222.244 kb on + strand, within DVU2126 at 2222.281 kb on - strand, within DVU2126 at 2222.332 kb on - strand, within DVU2126 at 2222.344 kb on + strand, within DVU2126 at 2222.541 kb on - strand, within DVU2126 at 2222.544 kb on + strand, within DVU2126 at 2222.680 kb on + strand at 2222.727 kb on - strand, within DVU2127 at 2222.734 kb on - strand, within DVU2127 at 2222.786 kb on - strand, within DVU2127 at 2222.804 kb on - strand, within DVU2127 at 2222.829 kb on + strand, within DVU2127 at 2222.837 kb on - strand, within DVU2127 at 2222.867 kb on + strand, within DVU2127 at 2222.965 kb on + strand, within DVU2127 at 2222.989 kb on - strand, within DVU2127 at 2223.122 kb on + strand, within DVU2127 at 2223.130 kb on - strand, within DVU2127 at 2223.151 kb on + strand, within DVU2127 at 2223.255 kb on + strand, within DVU2127 at 2223.329 kb on - strand, within DVU2127 at 2223.440 kb on - strand, within DVU2127 at 2223.486 kb on + strand, within DVU2127 at 2223.503 kb on + strand, within DVU2127
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glutamine (N) remove 2,221,354 + DVU2125 0.41 +1.3 2,221,354 + DVU2125 0.41 -0.5 2,221,354 + DVU2125 0.41 -0.5 2,221,362 - DVU2125 0.42 -0.3 2,221,471 + DVU2125 0.52 -3.5 2,221,559 - DVU2125 0.60 -0.4 2,221,565 + DVU2125 0.60 -0.2 2,221,578 - DVU2125 0.61 -0.2 2,221,639 - DVU2125 0.67 -0.1 2,221,827 + DVU2125 0.84 -0.7 2,221,827 + DVU2125 0.84 -3.7 2,221,936 - -0.2 2,221,984 - -0.4 2,222,004 + -0.5 2,222,222 - -0.5 2,222,244 + DVU2126 0.12 -2.7 2,222,281 - DVU2126 0.22 -3.2 2,222,332 - DVU2126 0.35 +0.2 2,222,344 + DVU2126 0.38 +0.5 2,222,541 - DVU2126 0.88 -1.9 2,222,544 + DVU2126 0.89 -1.0 2,222,680 + -0.5 2,222,727 - DVU2127 0.10 -4.4 2,222,734 - DVU2127 0.11 -0.6 2,222,786 - DVU2127 0.15 -2.8 2,222,804 - DVU2127 0.16 -0.0 2,222,829 + DVU2127 0.18 -2.9 2,222,837 - DVU2127 0.19 -0.9 2,222,867 + DVU2127 0.21 -0.5 2,222,965 + DVU2127 0.29 -0.7 2,222,989 - DVU2127 0.31 +0.5 2,223,122 + DVU2127 0.42 +1.3 2,223,130 - DVU2127 0.42 -0.2 2,223,151 + DVU2127 0.44 -0.6 2,223,255 + DVU2127 0.52 +0.3 2,223,329 - DVU2127 0.58 +0.1 2,223,440 - DVU2127 0.67 +1.2 2,223,486 + DVU2127 0.70 -0.4 2,223,503 + DVU2127 0.72 -0.7
Or see this region's nucleotide sequence