Experiment: MoLS4 with L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2067 and DVU2068 overlap by 1 nucleotides DVU2068 and DORF15383 are separated by 53 nucleotides DORF15383 and dprA are separated by 19 nucleotides
DVU2067: DVU2067 - GGDEF domain protein (TIGR), at 2,147,609 to 2,148,730
DVU2067
DVU2068: DVU2068 - HD domain protein (TIGR), at 2,148,730 to 2,149,572
DVU2068
DORF15383: DORF15383 - SEED: FIG00602628: hypothetical protein, at 2,149,626 to 2,149,958
DORF15383
DVU2069: dprA - DNA processing protein DprA, putative (TIGR), at 2,149,978 to 2,151,969
dprA
Position (kb)
2148
2149
2150 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2148.012 kb on - strand, within DVU2067 at 2148.125 kb on - strand, within DVU2067 at 2148.125 kb on - strand, within DVU2067 at 2148.125 kb on - strand, within DVU2067 at 2148.198 kb on - strand, within DVU2067 at 2148.198 kb on - strand, within DVU2067 at 2148.221 kb on + strand, within DVU2067 at 2148.603 kb on - strand, within DVU2067 at 2148.706 kb on - strand at 2148.708 kb on + strand at 2148.778 kb on + strand at 2148.819 kb on + strand, within DVU2068 at 2148.999 kb on - strand, within DVU2068 at 2149.010 kb on - strand, within DVU2068 at 2149.021 kb on - strand, within DVU2068 at 2149.048 kb on + strand, within DVU2068 at 2149.056 kb on - strand, within DVU2068 at 2149.075 kb on - strand, within DVU2068 at 2149.148 kb on - strand, within DVU2068 at 2149.251 kb on + strand, within DVU2068 at 2149.275 kb on - strand, within DVU2068 at 2149.333 kb on - strand, within DVU2068 at 2149.378 kb on - strand, within DVU2068 at 2149.413 kb on - strand, within DVU2068 at 2149.419 kb on + strand, within DVU2068 at 2149.511 kb on + strand at 2149.594 kb on - strand at 2149.603 kb on + strand at 2149.697 kb on + strand, within DORF15383 at 2149.697 kb on + strand, within DORF15383 at 2149.705 kb on - strand, within DORF15383 at 2149.705 kb on - strand, within DORF15383 at 2149.705 kb on - strand, within DORF15383 at 2149.843 kb on + strand, within DORF15383 at 2149.867 kb on - strand, within DORF15383 at 2149.896 kb on - strand, within DORF15383 at 2149.901 kb on + strand, within DORF15383 at 2149.906 kb on - strand, within DORF15383 at 2149.911 kb on + strand, within DORF15383 at 2149.919 kb on - strand, within DORF15383 at 2149.986 kb on - strand at 2150.018 kb on + strand at 2150.149 kb on + strand at 2150.213 kb on + strand, within dprA at 2150.265 kb on + strand, within dprA at 2150.412 kb on - strand, within dprA at 2150.412 kb on - strand, within dprA at 2150.414 kb on + strand, within dprA at 2150.416 kb on + strand, within dprA at 2150.440 kb on + strand, within dprA at 2150.475 kb on + strand, within dprA at 2150.539 kb on + strand, within dprA
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glutamine (N) remove 2,148,012 - DVU2067 0.36 +0.4 2,148,125 - DVU2067 0.46 +1.1 2,148,125 - DVU2067 0.46 +0.3 2,148,125 - DVU2067 0.46 +0.2 2,148,198 - DVU2067 0.52 -1.4 2,148,198 - DVU2067 0.52 -1.3 2,148,221 + DVU2067 0.55 -0.4 2,148,603 - DVU2067 0.89 -0.7 2,148,706 - -0.6 2,148,708 + -2.2 2,148,778 + -2.9 2,148,819 + DVU2068 0.11 -2.6 2,148,999 - DVU2068 0.32 -3.2 2,149,010 - DVU2068 0.33 +0.8 2,149,021 - DVU2068 0.35 -0.2 2,149,048 + DVU2068 0.38 -0.4 2,149,056 - DVU2068 0.39 +0.8 2,149,075 - DVU2068 0.41 -3.2 2,149,148 - DVU2068 0.50 +0.4 2,149,251 + DVU2068 0.62 +0.7 2,149,275 - DVU2068 0.65 +0.1 2,149,333 - DVU2068 0.72 -3.4 2,149,378 - DVU2068 0.77 -0.3 2,149,413 - DVU2068 0.81 +0.2 2,149,419 + DVU2068 0.82 -3.1 2,149,511 + -0.0 2,149,594 - -3.2 2,149,603 + -0.3 2,149,697 + DORF15383 0.21 -2.8 2,149,697 + DORF15383 0.21 +0.3 2,149,705 - DORF15383 0.24 +0.1 2,149,705 - DORF15383 0.24 +0.3 2,149,705 - DORF15383 0.24 -0.6 2,149,843 + DORF15383 0.65 +0.2 2,149,867 - DORF15383 0.72 +0.1 2,149,896 - DORF15383 0.81 -0.1 2,149,901 + DORF15383 0.83 -0.3 2,149,906 - DORF15383 0.84 -0.2 2,149,911 + DORF15383 0.86 +0.2 2,149,919 - DORF15383 0.88 -2.5 2,149,986 - +0.2 2,150,018 + -3.2 2,150,149 + -0.2 2,150,213 + dprA DVU2069 0.12 -0.2 2,150,265 + dprA DVU2069 0.14 -0.8 2,150,412 - dprA DVU2069 0.22 -0.3 2,150,412 - dprA DVU2069 0.22 +0.7 2,150,414 + dprA DVU2069 0.22 -0.7 2,150,416 + dprA DVU2069 0.22 -2.8 2,150,440 + dprA DVU2069 0.23 -0.3 2,150,475 + dprA DVU2069 0.25 -0.0 2,150,539 + dprA DVU2069 0.28 -0.2
Or see this region's nucleotide sequence