Experiment: MoLS4 with L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1724 and DVU1725 overlap by 14 nucleotides DVU1725 and DVU1726 are separated by 135 nucleotides DVU1726 and DVU1727 overlap by 4 nucleotides DVU1727 and DVU1728 overlap by 1 nucleotides
DVU1724: DVU1724 - phage uncharacterized protein, putative (TIGR), at 1,797,329 to 1,798,933
DVU1724
DVU1725: DVU1725 - conserved hypothetical protein (TIGR), at 1,798,920 to 1,799,528
DVU1725
DVU1726: DVU1726 - hypothetical protein (TIGR), at 1,799,664 to 1,799,912
DVU1726
DVU1727: DVU1727 - hypothetical protein (TIGR), at 1,799,909 to 1,800,259
DVU1727
DVU1728: DVU1728 - conserved hypothetical protein (TIGR), at 1,800,259 to 1,800,675
DVU1728
Position (kb)
1798
1799
1800 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1797.934 kb on - strand, within DVU1724 at 1797.967 kb on + strand, within DVU1724 at 1797.985 kb on + strand, within DVU1724 at 1798.032 kb on + strand, within DVU1724 at 1798.032 kb on + strand, within DVU1724 at 1798.032 kb on + strand, within DVU1724 at 1798.203 kb on + strand, within DVU1724 at 1798.244 kb on - strand, within DVU1724 at 1798.263 kb on - strand, within DVU1724 at 1798.281 kb on - strand, within DVU1724 at 1798.288 kb on - strand, within DVU1724 at 1798.341 kb on + strand, within DVU1724 at 1798.376 kb on - strand, within DVU1724 at 1798.399 kb on - strand, within DVU1724 at 1798.407 kb on - strand, within DVU1724 at 1798.414 kb on + strand, within DVU1724 at 1798.414 kb on + strand, within DVU1724 at 1798.421 kb on - strand, within DVU1724 at 1798.422 kb on - strand, within DVU1724 at 1798.446 kb on + strand, within DVU1724 at 1798.498 kb on + strand, within DVU1724 at 1798.527 kb on - strand, within DVU1724 at 1798.578 kb on - strand, within DVU1724 at 1798.600 kb on + strand, within DVU1724 at 1798.614 kb on + strand, within DVU1724 at 1798.692 kb on - strand, within DVU1724 at 1798.731 kb on + strand, within DVU1724 at 1798.787 kb on - strand at 1798.789 kb on + strand at 1798.789 kb on + strand at 1798.797 kb on - strand at 1798.797 kb on - strand at 1798.797 kb on - strand at 1798.797 kb on - strand at 1798.858 kb on + strand at 1798.858 kb on + strand at 1798.861 kb on - strand at 1798.933 kb on - strand at 1798.938 kb on - strand at 1799.036 kb on + strand, within DVU1725 at 1799.044 kb on - strand, within DVU1725 at 1799.141 kb on + strand, within DVU1725 at 1799.149 kb on - strand, within DVU1725 at 1799.171 kb on + strand, within DVU1725 at 1799.171 kb on + strand, within DVU1725 at 1799.179 kb on - strand, within DVU1725 at 1799.179 kb on - strand, within DVU1725 at 1799.218 kb on + strand, within DVU1725 at 1799.224 kb on + strand, within DVU1725 at 1799.225 kb on - strand, within DVU1725 at 1799.274 kb on + strand, within DVU1725 at 1799.287 kb on + strand, within DVU1725 at 1799.397 kb on + strand, within DVU1725 at 1799.433 kb on - strand, within DVU1725 at 1799.524 kb on + strand at 1799.806 kb on - strand, within DVU1726 at 1799.970 kb on - strand, within DVU1727 at 1799.994 kb on + strand, within DVU1727 at 1800.048 kb on - strand, within DVU1727 at 1800.064 kb on + strand, within DVU1727
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glutamine (N) remove 1,797,934 - DVU1724 0.38 +0.3 1,797,967 + DVU1724 0.40 -1.1 1,797,985 + DVU1724 0.41 -0.4 1,798,032 + DVU1724 0.44 -0.0 1,798,032 + DVU1724 0.44 -3.1 1,798,032 + DVU1724 0.44 +0.2 1,798,203 + DVU1724 0.54 -0.0 1,798,244 - DVU1724 0.57 -0.6 1,798,263 - DVU1724 0.58 -0.5 1,798,281 - DVU1724 0.59 -0.6 1,798,288 - DVU1724 0.60 +0.7 1,798,341 + DVU1724 0.63 -0.2 1,798,376 - DVU1724 0.65 -0.2 1,798,399 - DVU1724 0.67 -0.0 1,798,407 - DVU1724 0.67 -0.0 1,798,414 + DVU1724 0.68 +0.1 1,798,414 + DVU1724 0.68 -1.0 1,798,421 - DVU1724 0.68 -0.6 1,798,422 - DVU1724 0.68 -2.3 1,798,446 + DVU1724 0.70 -1.1 1,798,498 + DVU1724 0.73 +0.5 1,798,527 - DVU1724 0.75 -0.2 1,798,578 - DVU1724 0.78 -0.0 1,798,600 + DVU1724 0.79 -0.2 1,798,614 + DVU1724 0.80 -0.6 1,798,692 - DVU1724 0.85 +0.2 1,798,731 + DVU1724 0.87 -0.2 1,798,787 - +0.1 1,798,789 + -0.7 1,798,789 + +1.1 1,798,797 - -0.5 1,798,797 - -2.5 1,798,797 - +0.5 1,798,797 - -0.2 1,798,858 + -2.3 1,798,858 + -0.1 1,798,861 - -0.7 1,798,933 - -1.4 1,798,938 - -0.3 1,799,036 + DVU1725 0.19 -0.2 1,799,044 - DVU1725 0.20 -2.8 1,799,141 + DVU1725 0.36 +0.3 1,799,149 - DVU1725 0.38 -0.0 1,799,171 + DVU1725 0.41 -3.1 1,799,171 + DVU1725 0.41 +0.2 1,799,179 - DVU1725 0.43 +0.5 1,799,179 - DVU1725 0.43 -0.6 1,799,218 + DVU1725 0.49 -0.6 1,799,224 + DVU1725 0.50 -0.5 1,799,225 - DVU1725 0.50 -0.1 1,799,274 + DVU1725 0.58 -0.1 1,799,287 + DVU1725 0.60 -0.8 1,799,397 + DVU1725 0.78 -3.1 1,799,433 - DVU1725 0.84 -0.3 1,799,524 + +0.6 1,799,806 - DVU1726 0.57 -0.9 1,799,970 - DVU1727 0.17 -0.1 1,799,994 + DVU1727 0.24 -1.1 1,800,048 - DVU1727 0.40 -2.6 1,800,064 + DVU1727 0.44 -0.4
Or see this region's nucleotide sequence