Experiment: MoLS4 with L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1712 and DVU1713 overlap by 31 nucleotides DVU1713 and DVU1714 are separated by 8 nucleotides DVU1714 and DVU1715 are separated by 172 nucleotides DVU1715 and DVU1716 are separated by 41 nucleotides
DVU1712: DVU1712 - hypothetical protein (TIGR), at 1,786,746 to 1,788,347
DVU1712
DVU1713: DVU1713 - hypothetical protein (TIGR), at 1,788,317 to 1,788,952
DVU1713
DVU1714: DVU1714 - conserved hypothetical protein (TIGR), at 1,788,961 to 1,791,054
DVU1714
DVU1715: DVU1715 - hypothetical protein (TIGR), at 1,791,227 to 1,791,814
DVU1715
DVU1716: DVU1716 - hypothetical protein (TIGR), at 1,791,856 to 1,792,200
DVU1716
Position (kb)
1788
1789
1790
1791
1792 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1788.027 kb on - strand, within DVU1712 at 1788.074 kb on + strand, within DVU1712 at 1788.160 kb on + strand, within DVU1712 at 1788.265 kb on - strand at 1788.300 kb on - strand at 1788.397 kb on - strand, within DVU1713 at 1788.412 kb on - strand, within DVU1713 at 1788.498 kb on - strand, within DVU1713 at 1788.505 kb on - strand, within DVU1713 at 1788.595 kb on - strand, within DVU1713 at 1788.647 kb on + strand, within DVU1713 at 1788.647 kb on + strand, within DVU1713 at 1788.647 kb on + strand, within DVU1713 at 1788.667 kb on + strand, within DVU1713 at 1788.671 kb on + strand, within DVU1713 at 1788.677 kb on + strand, within DVU1713 at 1788.677 kb on + strand, within DVU1713 at 1788.677 kb on + strand, within DVU1713 at 1788.677 kb on + strand, within DVU1713 at 1788.680 kb on - strand, within DVU1713 at 1788.685 kb on - strand, within DVU1713 at 1788.713 kb on + strand, within DVU1713 at 1788.721 kb on - strand, within DVU1713 at 1788.776 kb on - strand, within DVU1713 at 1788.776 kb on - strand, within DVU1713 at 1788.788 kb on + strand, within DVU1713 at 1788.805 kb on + strand, within DVU1713 at 1788.825 kb on + strand, within DVU1713 at 1788.887 kb on - strand, within DVU1713 at 1788.998 kb on - strand at 1789.032 kb on + strand at 1789.045 kb on + strand at 1789.053 kb on - strand at 1789.053 kb on - strand at 1789.053 kb on - strand at 1789.053 kb on - strand at 1789.159 kb on - strand at 1789.159 kb on - strand at 1789.172 kb on + strand, within DVU1714 at 1789.175 kb on - strand, within DVU1714 at 1789.187 kb on + strand, within DVU1714 at 1789.201 kb on - strand, within DVU1714 at 1789.260 kb on - strand, within DVU1714 at 1789.284 kb on - strand, within DVU1714 at 1789.378 kb on - strand, within DVU1714 at 1789.749 kb on + strand, within DVU1714 at 1789.768 kb on + strand, within DVU1714 at 1789.778 kb on - strand, within DVU1714 at 1789.790 kb on + strand, within DVU1714 at 1789.798 kb on - strand, within DVU1714 at 1789.814 kb on - strand, within DVU1714 at 1789.884 kb on - strand, within DVU1714 at 1789.978 kb on + strand, within DVU1714 at 1790.159 kb on - strand, within DVU1714 at 1790.225 kb on - strand, within DVU1714 at 1790.348 kb on + strand, within DVU1714 at 1790.389 kb on - strand, within DVU1714 at 1790.412 kb on - strand, within DVU1714 at 1790.449 kb on + strand, within DVU1714 at 1790.545 kb on - strand, within DVU1714 at 1790.727 kb on - strand, within DVU1714 at 1790.738 kb on + strand, within DVU1714 at 1790.805 kb on + strand, within DVU1714 at 1790.871 kb on + strand at 1790.898 kb on + strand at 1790.901 kb on - strand at 1790.906 kb on - strand at 1791.001 kb on + strand at 1791.038 kb on + strand at 1791.038 kb on + strand at 1791.046 kb on - strand at 1791.046 kb on - strand at 1791.046 kb on - strand at 1791.167 kb on - strand at 1791.232 kb on - strand at 1791.273 kb on - strand at 1791.292 kb on - strand, within DVU1715 at 1791.297 kb on + strand, within DVU1715 at 1791.390 kb on - strand, within DVU1715 at 1791.432 kb on - strand, within DVU1715 at 1791.521 kb on + strand, within DVU1715 at 1791.550 kb on - strand, within DVU1715 at 1791.550 kb on - strand, within DVU1715 at 1791.597 kb on - strand, within DVU1715 at 1791.632 kb on - strand, within DVU1715 at 1791.711 kb on + strand, within DVU1715 at 1791.756 kb on + strand at 1791.847 kb on - strand at 1791.847 kb on - strand at 1791.905 kb on - strand, within DVU1716 at 1791.919 kb on + strand, within DVU1716 at 1791.927 kb on - strand, within DVU1716 at 1791.927 kb on - strand, within DVU1716 at 1791.942 kb on - strand, within DVU1716 at 1792.009 kb on + strand, within DVU1716
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glutamine (N) remove 1,788,027 - DVU1712 0.80 -0.5 1,788,074 + DVU1712 0.83 -0.3 1,788,160 + DVU1712 0.88 +0.3 1,788,265 - -3.4 1,788,300 - +1.3 1,788,397 - DVU1713 0.13 -0.5 1,788,412 - DVU1713 0.15 -0.4 1,788,498 - DVU1713 0.28 +0.5 1,788,505 - DVU1713 0.30 -0.4 1,788,595 - DVU1713 0.44 +0.1 1,788,647 + DVU1713 0.52 +0.6 1,788,647 + DVU1713 0.52 -0.1 1,788,647 + DVU1713 0.52 -0.4 1,788,667 + DVU1713 0.55 -2.7 1,788,671 + DVU1713 0.56 +0.2 1,788,677 + DVU1713 0.57 +0.3 1,788,677 + DVU1713 0.57 +0.1 1,788,677 + DVU1713 0.57 -1.8 1,788,677 + DVU1713 0.57 +2.1 1,788,680 - DVU1713 0.57 -0.9 1,788,685 - DVU1713 0.58 +0.2 1,788,713 + DVU1713 0.62 -0.0 1,788,721 - DVU1713 0.64 +0.8 1,788,776 - DVU1713 0.72 +0.3 1,788,776 - DVU1713 0.72 +0.2 1,788,788 + DVU1713 0.74 -0.2 1,788,805 + DVU1713 0.77 +0.3 1,788,825 + DVU1713 0.80 -3.1 1,788,887 - DVU1713 0.90 -0.1 1,788,998 - +1.7 1,789,032 + -0.3 1,789,045 + -2.9 1,789,053 - -0.9 1,789,053 - -0.6 1,789,053 - -0.1 1,789,053 - -2.6 1,789,159 - -3.0 1,789,159 - -0.2 1,789,172 + DVU1714 0.10 +0.8 1,789,175 - DVU1714 0.10 -0.4 1,789,187 + DVU1714 0.11 -3.3 1,789,201 - DVU1714 0.11 -0.4 1,789,260 - DVU1714 0.14 +0.1 1,789,284 - DVU1714 0.15 -3.3 1,789,378 - DVU1714 0.20 -3.3 1,789,749 + DVU1714 0.38 -0.1 1,789,768 + DVU1714 0.39 -0.6 1,789,778 - DVU1714 0.39 -1.3 1,789,790 + DVU1714 0.40 -0.3 1,789,798 - DVU1714 0.40 -0.4 1,789,814 - DVU1714 0.41 -0.7 1,789,884 - DVU1714 0.44 -0.3 1,789,978 + DVU1714 0.49 +0.1 1,790,159 - DVU1714 0.57 +0.5 1,790,225 - DVU1714 0.60 +0.1 1,790,348 + DVU1714 0.66 +0.5 1,790,389 - DVU1714 0.68 +0.2 1,790,412 - DVU1714 0.69 +0.8 1,790,449 + DVU1714 0.71 -2.1 1,790,545 - DVU1714 0.76 -0.3 1,790,727 - DVU1714 0.84 -0.3 1,790,738 + DVU1714 0.85 -0.5 1,790,805 + DVU1714 0.88 -0.2 1,790,871 + -0.2 1,790,898 + -0.2 1,790,901 - -0.3 1,790,906 - +1.1 1,791,001 + +0.0 1,791,038 + +0.4 1,791,038 + +0.1 1,791,046 - -0.7 1,791,046 - +0.1 1,791,046 - -0.5 1,791,167 - -0.2 1,791,232 - -0.6 1,791,273 - +0.9 1,791,292 - DVU1715 0.11 -3.4 1,791,297 + DVU1715 0.12 +0.4 1,791,390 - DVU1715 0.28 +0.1 1,791,432 - DVU1715 0.35 -0.1 1,791,521 + DVU1715 0.50 +1.4 1,791,550 - DVU1715 0.55 +0.0 1,791,550 - DVU1715 0.55 +0.1 1,791,597 - DVU1715 0.63 -0.5 1,791,632 - DVU1715 0.69 -0.0 1,791,711 + DVU1715 0.82 +0.0 1,791,756 + +0.1 1,791,847 - +2.5 1,791,847 - -0.2 1,791,905 - DVU1716 0.14 -0.5 1,791,919 + DVU1716 0.18 -0.0 1,791,927 - DVU1716 0.21 +0.0 1,791,927 - DVU1716 0.21 -0.2 1,791,942 - DVU1716 0.25 -0.3 1,792,009 + DVU1716 0.44 -0.5
Or see this region's nucleotide sequence