Experiment: MoLS4 with L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1523 and DVU1524 are separated by 2 nucleotides DVU1524 and DVU1525 are separated by 19 nucleotides
DVU1523: DVU1523 - hypothetical protein (TIGR), at 1,591,191 to 1,592,219
DVU1523
DVU1524: DVU1524 - conserved hypothetical protein (TIGR), at 1,592,222 to 1,593,118
DVU1524
DVU1525: DVU1525 - conserved domain protein (TIGR), at 1,593,138 to 1,594,130
DVU1525
Position (kb)
1592
1593
1594 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 1591.239 kb on - strand at 1591.268 kb on - strand at 1591.293 kb on - strand at 1591.331 kb on + strand, within DVU1523 at 1591.339 kb on - strand, within DVU1523 at 1591.339 kb on - strand, within DVU1523 at 1591.370 kb on + strand, within DVU1523 at 1591.370 kb on + strand, within DVU1523 at 1591.378 kb on - strand, within DVU1523 at 1591.378 kb on - strand, within DVU1523 at 1591.378 kb on - strand, within DVU1523 at 1591.381 kb on + strand, within DVU1523 at 1591.389 kb on - strand, within DVU1523 at 1591.549 kb on + strand, within DVU1523 at 1591.585 kb on - strand, within DVU1523 at 1591.603 kb on - strand, within DVU1523 at 1591.743 kb on - strand, within DVU1523 at 1591.775 kb on + strand, within DVU1523 at 1591.783 kb on - strand, within DVU1523 at 1591.813 kb on - strand, within DVU1523 at 1591.824 kb on + strand, within DVU1523 at 1591.832 kb on - strand, within DVU1523 at 1591.866 kb on + strand, within DVU1523 at 1591.984 kb on - strand, within DVU1523 at 1592.001 kb on - strand, within DVU1523 at 1592.001 kb on - strand, within DVU1523 at 1592.098 kb on + strand, within DVU1523 at 1592.106 kb on - strand, within DVU1523 at 1592.213 kb on + strand at 1592.213 kb on + strand at 1592.221 kb on - strand at 1592.221 kb on - strand at 1592.221 kb on - strand at 1592.221 kb on - strand at 1592.221 kb on - strand at 1592.319 kb on + strand, within DVU1524 at 1592.398 kb on - strand, within DVU1524 at 1592.407 kb on + strand, within DVU1524 at 1592.466 kb on - strand, within DVU1524 at 1592.558 kb on + strand, within DVU1524 at 1592.588 kb on - strand, within DVU1524 at 1592.633 kb on - strand, within DVU1524 at 1592.650 kb on + strand, within DVU1524 at 1592.659 kb on + strand, within DVU1524 at 1592.673 kb on - strand, within DVU1524 at 1592.729 kb on - strand, within DVU1524 at 1592.743 kb on - strand, within DVU1524 at 1592.748 kb on - strand, within DVU1524 at 1592.748 kb on - strand, within DVU1524 at 1592.764 kb on + strand, within DVU1524 at 1592.764 kb on + strand, within DVU1524 at 1592.807 kb on + strand, within DVU1524 at 1592.817 kb on - strand, within DVU1524 at 1592.875 kb on + strand, within DVU1524 at 1592.973 kb on - strand, within DVU1524 at 1592.992 kb on + strand, within DVU1524 at 1593.000 kb on - strand, within DVU1524 at 1593.039 kb on + strand at 1593.064 kb on + strand at 1593.072 kb on - strand at 1593.072 kb on - strand at 1593.072 kb on - strand at 1593.200 kb on - strand at 1593.395 kb on + strand, within DVU1525 at 1593.551 kb on + strand, within DVU1525 at 1593.624 kb on + strand, within DVU1525 at 1593.624 kb on + strand, within DVU1525 at 1593.712 kb on + strand, within DVU1525 at 1593.712 kb on - strand, within DVU1525 at 1593.725 kb on - strand, within DVU1525 at 1593.766 kb on + strand, within DVU1525 at 1593.854 kb on + strand, within DVU1525 at 1593.905 kb on + strand, within DVU1525 at 1593.907 kb on + strand, within DVU1525 at 1593.934 kb on - strand, within DVU1525 at 1593.945 kb on + strand, within DVU1525 at 1593.955 kb on + strand, within DVU1525 at 1593.971 kb on + strand, within DVU1525 at 1593.972 kb on + strand, within DVU1525 at 1593.991 kb on + strand, within DVU1525 at 1594.055 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glutamine (N) remove 1,591,239 - -0.2 1,591,268 - -0.2 1,591,293 - +0.2 1,591,331 + DVU1523 0.14 +1.8 1,591,339 - DVU1523 0.14 +0.9 1,591,339 - DVU1523 0.14 -0.8 1,591,370 + DVU1523 0.17 +0.3 1,591,370 + DVU1523 0.17 +0.1 1,591,378 - DVU1523 0.18 -0.5 1,591,378 - DVU1523 0.18 +0.6 1,591,378 - DVU1523 0.18 -0.2 1,591,381 + DVU1523 0.18 -3.3 1,591,389 - DVU1523 0.19 +0.4 1,591,549 + DVU1523 0.35 -0.3 1,591,585 - DVU1523 0.38 -0.4 1,591,603 - DVU1523 0.40 +0.1 1,591,743 - DVU1523 0.54 +0.5 1,591,775 + DVU1523 0.57 +1.5 1,591,783 - DVU1523 0.58 -0.5 1,591,813 - DVU1523 0.60 -0.0 1,591,824 + DVU1523 0.62 -0.3 1,591,832 - DVU1523 0.62 -0.5 1,591,866 + DVU1523 0.66 +2.2 1,591,984 - DVU1523 0.77 +0.7 1,592,001 - DVU1523 0.79 -0.4 1,592,001 - DVU1523 0.79 +0.1 1,592,098 + DVU1523 0.88 -2.9 1,592,106 - DVU1523 0.89 -0.4 1,592,213 + -3.4 1,592,213 + -3.2 1,592,221 - +0.0 1,592,221 - -0.1 1,592,221 - -3.4 1,592,221 - -0.2 1,592,221 - -3.1 1,592,319 + DVU1524 0.11 +1.5 1,592,398 - DVU1524 0.20 -0.4 1,592,407 + DVU1524 0.21 -0.3 1,592,466 - DVU1524 0.27 -5.2 1,592,558 + DVU1524 0.37 -0.4 1,592,588 - DVU1524 0.41 -1.8 1,592,633 - DVU1524 0.46 -0.2 1,592,650 + DVU1524 0.48 +0.6 1,592,659 + DVU1524 0.49 -0.4 1,592,673 - DVU1524 0.50 -0.5 1,592,729 - DVU1524 0.57 -0.4 1,592,743 - DVU1524 0.58 -2.7 1,592,748 - DVU1524 0.59 -0.3 1,592,748 - DVU1524 0.59 -0.2 1,592,764 + DVU1524 0.60 +0.1 1,592,764 + DVU1524 0.60 -0.5 1,592,807 + DVU1524 0.65 -1.0 1,592,817 - DVU1524 0.66 +0.3 1,592,875 + DVU1524 0.73 -3.1 1,592,973 - DVU1524 0.84 +0.3 1,592,992 + DVU1524 0.86 +0.7 1,593,000 - DVU1524 0.87 -1.1 1,593,039 + -0.4 1,593,064 + -2.7 1,593,072 - -0.4 1,593,072 - -0.5 1,593,072 - -0.3 1,593,200 - -0.4 1,593,395 + DVU1525 0.26 +0.5 1,593,551 + DVU1525 0.42 -0.2 1,593,624 + DVU1525 0.49 +0.1 1,593,624 + DVU1525 0.49 -4.4 1,593,712 + DVU1525 0.58 -0.1 1,593,712 - DVU1525 0.58 +0.3 1,593,725 - DVU1525 0.59 -1.0 1,593,766 + DVU1525 0.63 -0.7 1,593,854 + DVU1525 0.72 -3.6 1,593,905 + DVU1525 0.77 -2.1 1,593,907 + DVU1525 0.77 -2.8 1,593,934 - DVU1525 0.80 +0.8 1,593,945 + DVU1525 0.81 -0.4 1,593,955 + DVU1525 0.82 -0.2 1,593,971 + DVU1525 0.84 +0.1 1,593,972 + DVU1525 0.84 -0.1 1,593,991 + DVU1525 0.86 -1.0 1,594,055 + -0.1
Or see this region's nucleotide sequence