Experiment: MoLS4 with L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0936 and DVU0937 are separated by 13 nucleotides DVU0937 and DVU0938 are separated by 63 nucleotides DVU0938 and DVU0939 are separated by 399 nucleotides
DVU0936: DVU0936 - hypothetical protein (TIGR), at 1,028,158 to 1,028,445
DVU0936
DVU0937: DVU0937 - hypothetical protein (TIGR), at 1,028,459 to 1,028,845
DVU0937
DVU0938: DVU0938 - isoamylase N-terminal domain protein (TIGR), at 1,028,909 to 1,029,277
DVU0938
DVU0939: DVU0939 - conserved hypothetical protein (TIGR), at 1,029,677 to 1,030,426
DVU0939
Position (kb)
1028
1029
1030 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 1028.013 kb on + strand at 1028.021 kb on - strand at 1028.029 kb on + strand at 1028.150 kb on - strand at 1028.153 kb on + strand at 1028.189 kb on - strand, within DVU0936 at 1028.241 kb on - strand, within DVU0936 at 1028.302 kb on - strand, within DVU0936 at 1028.312 kb on - strand, within DVU0936 at 1028.312 kb on - strand, within DVU0936 at 1028.314 kb on + strand, within DVU0936 at 1028.314 kb on + strand, within DVU0936 at 1028.314 kb on + strand, within DVU0936 at 1028.484 kb on - strand at 1028.516 kb on + strand, within DVU0937 at 1028.660 kb on + strand, within DVU0937 at 1028.747 kb on - strand, within DVU0937 at 1028.997 kb on - strand, within DVU0938 at 1029.049 kb on + strand, within DVU0938 at 1029.097 kb on + strand, within DVU0938 at 1029.157 kb on - strand, within DVU0938 at 1029.412 kb on + strand at 1029.449 kb on - strand at 1029.511 kb on + strand at 1029.529 kb on - strand at 1029.558 kb on - strand at 1029.626 kb on + strand at 1029.626 kb on + strand at 1029.626 kb on + strand at 1029.626 kb on + strand at 1029.626 kb on + strand at 1029.626 kb on + strand at 1029.626 kb on + strand at 1029.634 kb on - strand at 1029.634 kb on - strand at 1029.634 kb on - strand at 1029.634 kb on - strand at 1029.634 kb on - strand at 1029.634 kb on - strand at 1029.634 kb on - strand at 1029.634 kb on - strand at 1029.636 kb on - strand at 1029.696 kb on + strand at 1029.696 kb on + strand at 1029.704 kb on - strand at 1029.704 kb on - strand at 1029.717 kb on - strand at 1029.724 kb on - strand at 1029.760 kb on + strand, within DVU0939 at 1029.788 kb on + strand, within DVU0939 at 1029.820 kb on - strand, within DVU0939 at 1029.892 kb on + strand, within DVU0939 at 1029.917 kb on + strand, within DVU0939 at 1029.917 kb on + strand, within DVU0939 at 1029.989 kb on + strand, within DVU0939 at 1029.989 kb on + strand, within DVU0939 at 1030.027 kb on + strand, within DVU0939 at 1030.079 kb on + strand, within DVU0939 at 1030.120 kb on - strand, within DVU0939
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glutamine (N) remove 1,028,013 + -2.4 1,028,021 - +0.0 1,028,029 + -1.3 1,028,150 - -2.9 1,028,153 + -0.9 1,028,189 - DVU0936 0.11 -2.7 1,028,241 - DVU0936 0.29 +0.1 1,028,302 - DVU0936 0.50 -0.3 1,028,312 - DVU0936 0.53 -0.0 1,028,312 - DVU0936 0.53 +0.1 1,028,314 + DVU0936 0.54 +0.5 1,028,314 + DVU0936 0.54 -0.0 1,028,314 + DVU0936 0.54 -0.5 1,028,484 - -0.0 1,028,516 + DVU0937 0.15 +0.0 1,028,660 + DVU0937 0.52 -0.1 1,028,747 - DVU0937 0.74 -4.0 1,028,997 - DVU0938 0.24 +3.0 1,029,049 + DVU0938 0.38 -3.4 1,029,097 + DVU0938 0.51 -3.0 1,029,157 - DVU0938 0.67 -0.2 1,029,412 + -0.5 1,029,449 - +0.5 1,029,511 + +0.8 1,029,529 - -0.1 1,029,558 - -3.1 1,029,626 + -0.2 1,029,626 + -0.5 1,029,626 + +0.7 1,029,626 + -0.4 1,029,626 + -0.1 1,029,626 + -0.7 1,029,626 + -0.0 1,029,634 - -0.1 1,029,634 - +0.1 1,029,634 - +0.3 1,029,634 - +0.4 1,029,634 - -2.0 1,029,634 - -1.3 1,029,634 - +0.2 1,029,634 - +0.3 1,029,636 - +1.4 1,029,696 + +0.2 1,029,696 + -0.1 1,029,704 - +0.1 1,029,704 - +0.2 1,029,717 - +0.3 1,029,724 - -0.4 1,029,760 + DVU0939 0.11 +1.0 1,029,788 + DVU0939 0.15 -0.4 1,029,820 - DVU0939 0.19 -2.7 1,029,892 + DVU0939 0.29 -1.0 1,029,917 + DVU0939 0.32 -0.6 1,029,917 + DVU0939 0.32 -0.0 1,029,989 + DVU0939 0.42 +0.2 1,029,989 + DVU0939 0.42 -0.7 1,030,027 + DVU0939 0.47 -0.3 1,030,079 + DVU0939 0.54 +0.2 1,030,120 - DVU0939 0.59 +0.4
Or see this region's nucleotide sequence