Strain Fitness in Rhodospirillum rubrum S1H around Rru_B0031

Experiment: L-Malic Acid (C) and N2; high light

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Malic Acid (C) and N2; high light
29,653	-		Rru_B0030	0.48	-0.7
29,690	+		Rru_B0030	0.50	-0.6
29,731	+		Rru_B0030	0.53	-0.6
29,731	+		Rru_B0030	0.53	-0.4
29,731	+		Rru_B0030	0.53	-0.6
29,732	-		Rru_B0030	0.53	-0.6
29,732	-		Rru_B0030	0.53	-0.5
29,732	-		Rru_B0030	0.53	-0.7
29,737	+		Rru_B0030	0.54	-0.6
29,737	+		Rru_B0030	0.54	-0.6
29,737	+		Rru_B0030	0.54	-0.6
29,737	+		Rru_B0030	0.54	-0.6
29,738	-		Rru_B0030	0.54	-0.6
29,738	-		Rru_B0030	0.54	-0.7
29,738	-		Rru_B0030	0.54	-0.5
29,738	-		Rru_B0030	0.54	-0.6
29,738	-		Rru_B0030	0.54	-0.6
29,738	-		Rru_B0030	0.54	-1.1
29,738	-		Rru_B0030	0.54	-1.6
29,738	-		Rru_B0030	0.54	-0.3
29,738	-		Rru_B0030	0.54	-0.6
29,738	-		Rru_B0030	0.54	-0.6
29,738	-		Rru_B0030	0.54	-0.6
29,840	+		Rru_B0030	0.61	-0.6
29,854	+		Rru_B0030	0.62	-0.6
29,854	+		Rru_B0030	0.62	-0.6
29,855	-		Rru_B0030	0.62	-0.9
29,855	-		Rru_B0030	0.62	-0.6
29,855	-		Rru_B0030	0.62	-0.6
29,855	-		Rru_B0030	0.62	-0.6
29,855	-		Rru_B0030	0.62	-0.6
29,855	-		Rru_B0030	0.62	-0.6
29,855	-		Rru_B0030	0.62	-0.6
29,954	+		Rru_B0030	0.69	-0.6
29,954	+		Rru_B0030	0.69	-1.6
29,954	+		Rru_B0030	0.69	-0.7
29,954	+		Rru_B0030	0.69	-0.6
29,955	-		Rru_B0030	0.70	-0.6
29,955	-		Rru_B0030	0.70	-0.6
29,955	-		Rru_B0030	0.70	-2.0
29,955	-		Rru_B0030	0.70	-1.0
29,955	-		Rru_B0030	0.70	-0.6
29,955	-		Rru_B0030	0.70	-0.6
29,956	+		Rru_B0030	0.70	-0.8
29,956	+		Rru_B0030	0.70	-1.6
29,956	+		Rru_B0030	0.70	-1.6
29,956	+		Rru_B0030	0.70	-1.2
29,956	+		Rru_B0030	0.70	-0.6
29,956	+		Rru_B0030	0.70	-1.6
29,957	-		Rru_B0030	0.70	-0.8
29,957	-		Rru_B0030	0.70	-0.6
29,957	-		Rru_B0030	0.70	-0.6
29,957	-		Rru_B0030	0.70	-0.6
29,957	-		Rru_B0030	0.70	-0.6
29,957	-		Rru_B0030	0.70	-0.6
29,957	-		Rru_B0030	0.70	-0.6
30,025	+		Rru_B0030	0.75	-0.6
30,026	-		Rru_B0030	0.75	-2.6
30,071	+		Rru_B0030	0.78	-1.6
30,071	+		Rru_B0030	0.78	-1.0
30,083	-		Rru_B0030	0.79	-0.6
30,113	+		Rru_B0030	0.81	-0.6
30,114	-		Rru_B0030	0.81	-0.6
30,114	-		Rru_B0030	0.81	-0.6
30,150	-		Rru_B0030	0.84	-0.6
30,151	+		Rru_B0030	0.84	-0.5
30,151	+		Rru_B0030	0.84	-0.9
30,151	+		Rru_B0030	0.84	-2.2
30,151	+		Rru_B0030	0.84	-0.6
30,152	-		Rru_B0030	0.84	-0.6
30,152	-		Rru_B0030	0.84	-0.6
30,174	+		Rru_B0030	0.85	-0.6
30,174	+		Rru_B0030	0.85	-0.6
30,174	+		Rru_B0030	0.85	-0.6
30,175	-		Rru_B0030	0.85	-1.3
30,175	-		Rru_B0030	0.85	-0.6
30,208	+		Rru_B0030	0.88	-0.6
30,208	+		Rru_B0030	0.88	-0.6
30,209	-		Rru_B0030	0.88	-0.6
30,209	-		Rru_B0030	0.88	-0.6
30,211	+		Rru_B0030	0.88	-0.6
30,211	+		Rru_B0030	0.88	-1.6
30,211	+		Rru_B0030	0.88	-0.6
30,211	+		Rru_B0030	0.88	-0.6
30,211	+		Rru_B0030	0.88	-0.6
30,211	+		Rru_B0030	0.88	-0.7
30,211	+		Rru_B0030	0.88	-0.7
30,212	-		Rru_B0030	0.88	-0.6
30,277	+				-0.6
30,277	+				-0.6
30,278	-				-0.5
30,325	+				-0.6
30,337	+				-0.6
30,337	+				-0.7
30,369	-				-0.6
30,369	-				-0.6
30,369	-				-0.3
30,371	+				-0.3
30,385	-				-0.6
30,432	+				-0.3
30,432	+				-0.6
30,483	+				-0.6
30,483	+				-2.6
30,484	-				-0.6
30,484	-				-0.6
30,484	-				-0.8
30,677	+		Rru_B0031	0.14	-0.6
30,677	+		Rru_B0031	0.14	-0.9
30,677	+		Rru_B0031	0.14	-0.2
30,677	+		Rru_B0031	0.14	-0.4
30,677	+		Rru_B0031	0.14	-1.6
30,678	-		Rru_B0031	0.14	-0.8
30,954	+		Rru_B0031	0.32	-1.5
30,955	-		Rru_B0031	0.32	-0.2
30,955	-		Rru_B0031	0.32	-0.6
31,102	+		Rru_B0031	0.42	-0.5
31,102	+		Rru_B0031	0.42	-0.6
31,103	-		Rru_B0031	0.42	-0.6
31,103	-		Rru_B0031	0.42	-0.6
31,131	+		Rru_B0031	0.44	-0.6
31,131	+		Rru_B0031	0.44	-0.6
31,131	+		Rru_B0031	0.44	-0.6
31,132	-		Rru_B0031	0.44	-1.6
31,132	-		Rru_B0031	0.44	-1.0
31,132	-		Rru_B0031	0.44	-1.6
31,291	-		Rru_B0031	0.54	-0.6
31,291	-		Rru_B0031	0.54	-0.6
31,317	+		Rru_B0031	0.56	-0.6
31,318	-		Rru_B0031	0.56	-0.1
31,318	-		Rru_B0031	0.56	-0.6
31,332	+		Rru_B0031	0.57	-0.6
31,332	+		Rru_B0031	0.57	-1.6
31,332	+		Rru_B0031	0.57	-0.6
31,332	+		Rru_B0031	0.57	-0.6
31,332	+		Rru_B0031	0.57	-0.6
31,332	+		Rru_B0031	0.57	-0.6
31,332	+		Rru_B0031	0.57	-0.6
31,395	+		Rru_B0031	0.61	-0.6
31,395	+		Rru_B0031	0.61	-0.6
31,396	-		Rru_B0031	0.61	-0.6
31,539	+		Rru_B0031	0.70	-0.6
31,539	+		Rru_B0031	0.70	-0.6
31,539	+		Rru_B0031	0.70	-2.2
31,539	+		Rru_B0031	0.70	-0.4
31,540	-		Rru_B0031	0.70	-0.6
31,540	-		Rru_B0031	0.70	-0.8
31,540	-		Rru_B0031	0.70	-0.6
31,540	-		Rru_B0031	0.70	-0.6
31,548	+		Rru_B0031	0.71	-1.6
31,548	+		Rru_B0031	0.71	-0.5
31,548	+		Rru_B0031	0.71	-0.6
31,548	+		Rru_B0031	0.71	-0.6
31,548	+		Rru_B0031	0.71	-0.6
31,549	-		Rru_B0031	0.71	-1.0
31,549	-		Rru_B0031	0.71	-0.7
31,549	-		Rru_B0031	0.71	-0.6
31,549	-		Rru_B0031	0.71	-0.6
31,626	+		Rru_B0031	0.76	-0.6
31,626	+		Rru_B0031	0.76	-0.6
31,626	+		Rru_B0031	0.76	-0.6
31,626	+		Rru_B0031	0.76	-0.6
31,626	+		Rru_B0031	0.76	-0.6
31,626	+		Rru_B0031	0.76	-0.6
31,626	+		Rru_B0031	0.76	-0.6
31,627	-		Rru_B0031	0.76	-2.2
31,627	-		Rru_B0031	0.76	-0.9
31,627	-		Rru_B0031	0.76	-0.6
31,627	-		Rru_B0031	0.76	-0.6
31,627	-		Rru_B0031	0.76	-1.6
31,627	-		Rru_B0031	0.76	-0.6
31,627	-		Rru_B0031	0.76	-0.5
31,627	-		Rru_B0031	0.76	-1.6
31,627	-		Rru_B0031	0.76	-0.6
31,627	-		Rru_B0031	0.76	-0.6
31,627	-		Rru_B0031	0.76	-0.6
31,627	-		Rru_B0031	0.76	-0.6
31,627	-		Rru_B0031	0.76	-1.6
31,854	+				-0.6
31,938	+				-0.6
31,939	-				-0.6
31,951	+				-0.7
31,951	+				-0.6
31,951	+				-1.6
31,951	+				-0.6
31,951	+				-0.6
31,952	-				-0.6
31,952	-				-0.6
31,952	-				-0.3
31,953	+				-0.6
31,954	-				-0.1
31,971	+				-1.6
31,971	+				-0.6
31,971	+				-0.8
31,971	+				-0.6
31,971	+				-0.6
31,971	+				-0.6
31,971	+				-1.1
31,972	-				-0.6
31,972	-				-0.8
31,972	-				-0.6
31,972	-				-0.9
31,972	-				-0.6
31,972	-				-0.6
32,013	+				-0.6
32,013	+				-0.6
32,014	-				-0.6
32,029	+				-0.6
32,030	-				-0.9
32,030	-				-0.6
32,058	+				-0.4
32,059	-				-0.6
32,059	-				-0.8
32,128	+		Rru_B0032	0.17	-0.6
32,129	-		Rru_B0032	0.17	-0.6
32,129	-		Rru_B0032	0.17	-0.6
32,180	+		Rru_B0032	0.34	-0.6
32,180	+		Rru_B0032	0.34	-0.6
32,180	+		Rru_B0032	0.34	-0.6
32,180	+		Rru_B0032	0.34	-0.6
32,180	+		Rru_B0032	0.34	-0.6
32,181	-		Rru_B0032	0.35	-1.6
32,181	-		Rru_B0032	0.35	-0.6
32,181	-		Rru_B0032	0.35	-1.1
32,181	-		Rru_B0032	0.35	-0.6
32,239	+		Rru_B0032	0.54	-0.6
32,239	+		Rru_B0032	0.54	-0.6
32,240	-		Rru_B0032	0.54	-1.6
32,381	+				-0.6
32,381	+				-0.2
32,381	+				-0.6
32,381	+				-0.6
32,381	+				-0.6
32,382	-				-0.6
32,417	+				-0.6
32,418	-				-0.6
32,492	+				-0.6
32,502	-				-0.6
32,711	-		Rru_B0033	0.32	-0.6
32,711	-		Rru_B0033	0.32	-1.3
32,764	+		Rru_B0033	0.40	-0.7
32,819	+		Rru_B0033	0.48	-0.6
32,819	+		Rru_B0033	0.48	-0.6
32,820	-		Rru_B0033	0.48	-0.6
32,820	-		Rru_B0033	0.48	-0.6
32,828	+		Rru_B0033	0.49	-0.6
32,828	+		Rru_B0033	0.49	-0.6
32,828	+		Rru_B0033	0.49	-0.6
32,829	-		Rru_B0033	0.49	-1.0
32,830	+		Rru_B0033	0.49	-0.6
32,831	-		Rru_B0033	0.49	-0.6
32,831	-		Rru_B0033	0.49	-0.6
32,831	-		Rru_B0033	0.49	-0.6
32,831	-		Rru_B0033	0.49	-0.6
32,831	-		Rru_B0033	0.49	-0.6
32,851	+		Rru_B0033	0.52	-2.2
32,851	+		Rru_B0033	0.52	-1.1
32,851	+		Rru_B0033	0.52	-0.6
32,852	-		Rru_B0033	0.52	-0.6
32,852	-		Rru_B0033	0.52	-0.6
32,867	+		Rru_B0033	0.55	-0.6
32,867	+		Rru_B0033	0.55	-0.6
32,868	-		Rru_B0033	0.55	-0.6
32,868	-		Rru_B0033	0.55	-0.7
32,869	+		Rru_B0033	0.55	-0.6
32,869	+		Rru_B0033	0.55	-2.9
32,869	+		Rru_B0033	0.55	-1.6
32,869	+		Rru_B0033	0.55	-0.6
32,869	+		Rru_B0033	0.55	-0.9
32,870	-		Rru_B0033	0.55	-1.0
32,870	-		Rru_B0033	0.55	-0.6
32,870	-		Rru_B0033	0.55	-0.6
32,870	-		Rru_B0033	0.55	-0.6
32,881	+		Rru_B0033	0.56	-0.6
32,881	+		Rru_B0033	0.56	-0.6
32,881	+		Rru_B0033	0.56	-1.1
32,881	+		Rru_B0033	0.56	-1.6
32,881	+		Rru_B0033	0.56	-0.6
32,881	+		Rru_B0033	0.56	-0.6
32,882	-		Rru_B0033	0.57	-0.6
32,929	+		Rru_B0033	0.63	-0.6
32,929	+		Rru_B0033	0.63	-1.6
32,929	+		Rru_B0033	0.63	-2.2
32,930	-		Rru_B0033	0.63	-2.9
32,930	-		Rru_B0033	0.63	-2.2
32,930	-		Rru_B0033	0.63	-0.6
32,930	-		Rru_B0033	0.63	-0.6
32,930	-		Rru_B0033	0.63	-0.9