Experiment: MoLS4 with L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2733 and tRNA-Leu are separated by 283 nucleotides tRNA-Leu and DORF43423 are separated by 331 nucleotides DORF43423 and paaK-3 are separated by 110 nucleotides
DVU2733: DVU2733 - adenine specific DNA methyltransferase, putative (TIGR), at 2,833,587 to 2,834,336
DVU2733
DVU_tRNA-Leu-7: tRNA-Leu - tRNA with anticodon GAG for Leu (VIMSS-AUTO), at 2,834,620 to 2,834,706
tRNA-Leu
DORF43423: DORF43423 - SEED: Uncharacterized protein conserved in archaea, at 2,835,038 to 2,836,108
DORF43423
DVU2735: paaK-3 - phenylacetate-coenzyme A ligase (TIGR), at 2,836,219 to 2,837,517
paaK-3
Position (kb)
2835
2836
2837 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2834.063 kb on + strand, within DVU2733 at 2834.141 kb on + strand, within DVU2733 at 2834.149 kb on - strand, within DVU2733 at 2834.149 kb on - strand, within DVU2733 at 2834.239 kb on - strand, within DVU2733 at 2834.289 kb on + strand at 2834.289 kb on + strand at 2834.302 kb on + strand at 2834.333 kb on - strand at 2834.456 kb on - strand at 2834.501 kb on + strand at 2834.501 kb on + strand at 2834.501 kb on + strand at 2834.509 kb on - strand at 2834.817 kb on + strand at 2834.906 kb on - strand at 2834.936 kb on + strand at 2834.997 kb on + strand at 2835.031 kb on + strand at 2835.087 kb on + strand at 2835.301 kb on + strand, within DORF43423 at 2835.301 kb on + strand, within DORF43423 at 2835.309 kb on - strand, within DORF43423 at 2835.327 kb on + strand, within DORF43423 at 2835.384 kb on + strand, within DORF43423 at 2835.400 kb on - strand, within DORF43423 at 2835.487 kb on - strand, within DORF43423 at 2835.578 kb on - strand, within DORF43423 at 2835.593 kb on - strand, within DORF43423 at 2835.617 kb on - strand, within DORF43423 at 2835.627 kb on - strand, within DORF43423 at 2835.692 kb on + strand, within DORF43423 at 2835.702 kb on - strand, within DORF43423 at 2835.748 kb on - strand, within DORF43423 at 2835.769 kb on + strand, within DORF43423 at 2835.824 kb on - strand, within DORF43423 at 2835.826 kb on + strand, within DORF43423 at 2835.973 kb on - strand, within DORF43423 at 2836.002 kb on + strand at 2836.002 kb on + strand at 2836.080 kb on + strand at 2836.083 kb on - strand at 2836.111 kb on - strand at 2836.111 kb on - strand at 2836.113 kb on + strand at 2836.126 kb on + strand at 2836.195 kb on - strand at 2836.287 kb on + strand at 2836.287 kb on + strand at 2836.295 kb on - strand at 2836.295 kb on - strand at 2836.295 kb on - strand at 2836.303 kb on - strand at 2836.308 kb on - strand at 2836.363 kb on - strand, within paaK-3 at 2836.373 kb on + strand, within paaK-3 at 2836.434 kb on - strand, within paaK-3 at 2836.445 kb on + strand, within paaK-3 at 2836.445 kb on + strand, within paaK-3 at 2836.481 kb on + strand, within paaK-3 at 2836.488 kb on - strand, within paaK-3 at 2836.488 kb on - strand, within paaK-3 at 2836.489 kb on - strand, within paaK-3 at 2836.511 kb on - strand, within paaK-3 at 2836.539 kb on - strand, within paaK-3 at 2836.576 kb on - strand, within paaK-3 at 2836.595 kb on + strand, within paaK-3 at 2836.621 kb on + strand, within paaK-3 at 2836.637 kb on + strand, within paaK-3 at 2836.695 kb on + strand, within paaK-3 at 2836.703 kb on - strand, within paaK-3 at 2836.742 kb on + strand, within paaK-3 at 2836.750 kb on - strand, within paaK-3 at 2836.756 kb on + strand, within paaK-3 at 2836.760 kb on - strand, within paaK-3 at 2836.851 kb on + strand, within paaK-3 at 2836.854 kb on - strand, within paaK-3 at 2836.903 kb on + strand, within paaK-3 at 2836.913 kb on + strand, within paaK-3 at 2836.953 kb on + strand, within paaK-3 at 2837.027 kb on - strand, within paaK-3 at 2837.061 kb on + strand, within paaK-3 at 2837.061 kb on + strand, within paaK-3 at 2837.066 kb on + strand, within paaK-3 at 2837.066 kb on + strand, within paaK-3 at 2837.070 kb on - strand, within paaK-3 at 2837.100 kb on + strand, within paaK-3 at 2837.103 kb on + strand, within paaK-3
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glutamine (N) remove 2,834,063 + DVU2733 0.63 -0.2 2,834,141 + DVU2733 0.74 +0.2 2,834,149 - DVU2733 0.75 -4.4 2,834,149 - DVU2733 0.75 +0.5 2,834,239 - DVU2733 0.87 +0.8 2,834,289 + -2.7 2,834,289 + -3.6 2,834,302 + -0.4 2,834,333 - -0.3 2,834,456 - -0.2 2,834,501 + -2.2 2,834,501 + -0.1 2,834,501 + -3.5 2,834,509 - -0.7 2,834,817 + +1.9 2,834,906 - -0.1 2,834,936 + +0.4 2,834,997 + -2.7 2,835,031 + -0.5 2,835,087 + -3.7 2,835,301 + DORF43423 0.25 +0.4 2,835,301 + DORF43423 0.25 -3.4 2,835,309 - DORF43423 0.25 -0.1 2,835,327 + DORF43423 0.27 +0.3 2,835,384 + DORF43423 0.32 -2.9 2,835,400 - DORF43423 0.34 -0.0 2,835,487 - DORF43423 0.42 -0.4 2,835,578 - DORF43423 0.50 -0.2 2,835,593 - DORF43423 0.52 +0.1 2,835,617 - DORF43423 0.54 -0.9 2,835,627 - DORF43423 0.55 -0.4 2,835,692 + DORF43423 0.61 +0.9 2,835,702 - DORF43423 0.62 +0.0 2,835,748 - DORF43423 0.66 -0.6 2,835,769 + DORF43423 0.68 -0.1 2,835,824 - DORF43423 0.73 -3.3 2,835,826 + DORF43423 0.74 -1.8 2,835,973 - DORF43423 0.87 +0.2 2,836,002 + -3.7 2,836,002 + -0.2 2,836,080 + +0.2 2,836,083 - -0.2 2,836,111 - -3.0 2,836,111 - -0.3 2,836,113 + -0.6 2,836,126 + -3.9 2,836,195 - +0.6 2,836,287 + +1.1 2,836,287 + -0.2 2,836,295 - -0.1 2,836,295 - +0.8 2,836,295 - +0.3 2,836,303 - -2.9 2,836,308 - -0.0 2,836,363 - paaK-3 DVU2735 0.11 -0.1 2,836,373 + paaK-3 DVU2735 0.12 -0.5 2,836,434 - paaK-3 DVU2735 0.17 +0.1 2,836,445 + paaK-3 DVU2735 0.17 -0.1 2,836,445 + paaK-3 DVU2735 0.17 -2.1 2,836,481 + paaK-3 DVU2735 0.20 +0.9 2,836,488 - paaK-3 DVU2735 0.21 -0.0 2,836,488 - paaK-3 DVU2735 0.21 -0.3 2,836,489 - paaK-3 DVU2735 0.21 +0.0 2,836,511 - paaK-3 DVU2735 0.22 +1.1 2,836,539 - paaK-3 DVU2735 0.25 -2.6 2,836,576 - paaK-3 DVU2735 0.27 +0.4 2,836,595 + paaK-3 DVU2735 0.29 +0.7 2,836,621 + paaK-3 DVU2735 0.31 -4.1 2,836,637 + paaK-3 DVU2735 0.32 -0.0 2,836,695 + paaK-3 DVU2735 0.37 -0.2 2,836,703 - paaK-3 DVU2735 0.37 -0.1 2,836,742 + paaK-3 DVU2735 0.40 +2.1 2,836,750 - paaK-3 DVU2735 0.41 -2.6 2,836,756 + paaK-3 DVU2735 0.41 -0.2 2,836,760 - paaK-3 DVU2735 0.42 +0.1 2,836,851 + paaK-3 DVU2735 0.49 +0.0 2,836,854 - paaK-3 DVU2735 0.49 -0.6 2,836,903 + paaK-3 DVU2735 0.53 +1.4 2,836,913 + paaK-3 DVU2735 0.53 +0.1 2,836,953 + paaK-3 DVU2735 0.57 -2.4 2,837,027 - paaK-3 DVU2735 0.62 -0.1 2,837,061 + paaK-3 DVU2735 0.65 -0.1 2,837,061 + paaK-3 DVU2735 0.65 +1.1 2,837,066 + paaK-3 DVU2735 0.65 -3.5 2,837,066 + paaK-3 DVU2735 0.65 -0.2 2,837,070 - paaK-3 DVU2735 0.66 -3.0 2,837,100 + paaK-3 DVU2735 0.68 +0.3 2,837,103 + paaK-3 DVU2735 0.68 -0.0
Or see this region's nucleotide sequence