Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS17960

Experiment: R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM
3,918,640	-				+1.8
3,918,681	+				-0.6
3,918,681	+				+1.5
3,918,682	-				-0.5
3,918,682	-				-1.0
3,918,682	-				+2.1
3,918,682	-				-2.2
3,918,696	+				+0.4
3,918,696	+				-1.0
3,918,696	+				+2.0
3,918,696	+				+1.1
3,918,696	+				-0.5
3,918,696	+				+0.5
3,918,697	-				-1.0
3,918,697	-				-0.5
3,918,738	+				-2.0
3,918,738	+				-0.4
3,918,738	+				+0.3
3,918,738	+				+0.7
3,918,738	+				-1.2
3,918,739	-				-0.5
3,918,739	-				-0.3
3,918,739	-				-1.3
3,918,739	-				-0.8
3,918,776	+				-0.6
3,918,776	+				+0.8
3,918,776	+				-0.3
3,918,777	-				+0.5
3,918,777	-				+1.1
3,918,777	-				+0.5
3,918,777	-				+0.8
3,918,804	+				+0.3
3,918,804	+				+2.5
3,918,804	+				-0.8
3,918,804	+				+0.1
3,918,804	+				-0.1
3,918,804	+				-1.7
3,918,804	+				-0.5
3,918,804	+				+3.1
3,918,804	+				-1.0
3,918,804	+				-1.0
3,918,804	+				-1.6
3,918,804	+				-1.2
3,918,804	+				+0.1
3,918,804	+				-0.0
3,918,804	+				+1.1
3,918,804	+				-0.7
3,918,804	+				+0.8
3,918,804	+				+0.3
3,918,804	+				-0.6
3,918,804	+				+0.7
3,918,804	+				+0.4
3,918,804	+				+0.5
3,918,804	+				-0.0
3,918,804	+				-1.3
3,918,804	+				-1.9
3,918,804	+				-1.3
3,918,804	+				-0.3
3,918,804	+				-3.5
3,918,804	+				+3.1
3,918,804	+				-1.3
3,918,804	+				-1.2
3,918,804	+				+2.5
3,918,804	+				+1.0
3,918,804	+				-0.5
3,918,804	+				-0.2
3,918,804	+				-1.2
3,918,804	+				-0.8
3,918,804	+				-0.6
3,918,804	+				-2.1
3,918,804	+				-0.2
3,918,804	+				-2.3
3,918,804	+				-1.0
3,918,804	+				-1.0
3,918,804	+				-0.5
3,918,804	+				-0.6
3,918,804	+				-0.7
3,918,804	+				-0.7
3,918,804	+				+0.3
3,918,804	+				+1.1
3,918,804	+				+1.2
3,918,804	+				-1.4
3,918,804	+				-1.8
3,918,804	+				+1.1
3,918,804	+				-0.3
3,918,804	+				-1.5
3,918,804	+				-1.6
3,918,804	+				+0.3
3,918,804	+				-1.6
3,918,804	+				+1.1
3,918,804	+				+2.0
3,918,804	+				-1.7
3,918,804	+				-1.3
3,918,804	+				-2.0
3,918,804	+				-0.4
3,918,804	+				+1.5
3,918,804	+				-0.3
3,918,804	+				-0.2
3,918,804	+				-2.6
3,918,804	+				-0.0
3,918,804	+				+0.3
3,918,804	+				+1.0
3,918,804	+				+0.4
3,918,804	+				+0.4
3,918,804	+				-0.8
3,918,804	+				+0.1
3,918,804	+				-1.6
3,918,804	+				+0.9
3,918,804	+				-1.0
3,918,804	+				+1.3
3,918,804	+				-2.0
3,918,804	+				+1.1
3,918,804	+				-0.3
3,918,804	+				+0.5
3,918,805	-				-0.2
3,918,805	-				+0.5
3,918,805	-				-1.5
3,918,805	-				+0.1
3,918,805	-				-0.6
3,918,805	-				+1.5
3,918,805	-				+0.5
3,918,805	-				+0.4
3,918,805	-				-0.3
3,918,805	-				-1.2
3,918,805	-				-0.3
3,918,805	-				-2.2
3,918,805	-				-0.9
3,918,805	-				-2.2
3,918,805	-				-0.3
3,918,805	-				+0.8
3,918,805	-				-0.9
3,918,805	-				+0.3
3,918,805	-				+0.1
3,918,805	-				+0.5
3,918,805	-				+0.3
3,918,805	-				-1.5
3,918,805	-				+0.5
3,918,805	-				+1.7
3,918,805	-				-1.5
3,918,805	-				+0.1
3,918,805	-				+1.0
3,918,805	-				-0.6
3,918,805	-				-0.9
3,918,805	-				-1.8
3,918,805	-				-1.7
3,918,805	-				+0.4
3,918,805	-				-1.3
3,918,805	-				+0.1
3,918,805	-				-1.0
3,918,805	-				-0.8
3,918,805	-				-1.2
3,918,805	-				+1.0
3,918,805	-				+2.1
3,918,805	-				-2.1
3,918,805	-				+3.1
3,918,805	-				-1.0
3,918,805	-				+1.0
3,918,805	-				-1.3
3,918,805	-				+1.5
3,918,805	-				+0.1
3,918,805	-				-1.1
3,918,805	-				+1.1
3,918,805	-				+1.1
3,918,805	-				+1.5
3,918,805	-				-1.0
3,918,805	-				-0.2
3,918,805	-				+3.5
3,918,805	-				-0.3
3,918,805	-				+1.5
3,918,805	-				+1.1
3,918,878	+				-0.9
3,918,878	+				+1.5
3,918,878	+				-0.9
3,918,878	+				-0.5
3,918,878	+				+0.8
3,918,878	+				-0.5
3,918,878	+				+1.1
3,918,878	+				+0.8
3,918,878	+				+1.0
3,918,878	+				-0.2
3,918,878	+				+1.1
3,918,878	+				-1.5
3,918,878	+				-1.5
3,918,878	+				+0.1
3,918,878	+				+1.4
3,918,878	+				-1.7
3,918,879	-				+0.5
3,918,879	-				+0.5
3,918,879	-				-3.0
3,918,879	-				-0.8
3,918,879	-				+0.1
3,918,879	-				-1.0
3,918,879	-				+0.3
3,918,879	-				+2.1
3,918,879	-				+0.3
3,918,879	-				-1.1
3,918,879	-				+1.1
3,918,879	-				-0.7
3,918,883	+				-0.3
3,918,883	+				+0.3
3,918,883	+				-0.2
3,918,883	+				-0.3
3,918,883	+				+1.5
3,918,883	+				-1.4
3,918,883	+				+0.4
3,918,883	+				-1.2
3,918,883	+				-2.0
3,918,883	+				-0.0
3,918,883	+				-0.8
3,918,883	+				-0.0
3,918,883	+				-0.7
3,918,883	+				-1.0
3,918,883	+				+1.1
3,918,884	-				+0.6
3,918,884	-				-0.0
3,918,884	-				-1.1
3,918,884	-				-0.7
3,918,884	-				+0.5
3,918,884	-				+2.3
3,918,884	-				+0.3
3,918,884	-				-0.1
3,918,884	-				-0.0
3,918,884	-				+0.3
3,918,884	-				+1.5
3,918,884	-				-1.1
3,918,884	-				-1.6
3,918,893	+				+0.6
3,918,893	+				-0.3
3,918,893	+				+0.3
3,918,893	+				+1.0
3,918,893	+				+0.3
3,918,893	+				-0.2
3,918,893	+				+0.3
3,918,893	+				+0.3
3,918,893	+				+2.1
3,918,893	+				-2.0
3,918,893	+				-1.4
3,918,893	+				-0.2
3,918,893	+				+2.1
3,918,893	+				-1.8
3,918,893	+				+0.8
3,918,893	+				-1.3
3,918,893	+				-0.9
3,918,893	+				-0.0
3,918,893	+				-1.5
3,918,893	+				+1.3
3,918,893	+				+3.7
3,918,893	+				+0.6
3,918,893	+				-1.2
3,918,893	+				-0.0
3,918,893	+				+0.8
3,918,893	+				-2.3
3,918,893	+				+0.3
3,918,893	+				+0.5
3,918,893	+				-1.8
3,918,893	+				-0.8
3,918,893	+				-0.3
3,918,893	+				-0.7
3,918,893	+				+0.5
3,918,893	+				-2.7
3,918,893	+				+2.1
3,918,893	+				-0.1
3,918,893	+				+1.0
3,918,893	+				+1.6
3,918,893	+				+0.4
3,918,893	+				-2.2
3,918,893	+				+0.2
3,918,893	+				-0.4
3,918,893	+				-0.8
3,918,893	+				+0.3
3,918,893	+				+0.7
3,918,893	+				-0.3
3,918,893	+				-1.0
3,918,893	+				-2.9
3,918,893	+				-0.1
3,918,893	+				-0.4
3,918,893	+				-1.3
3,918,893	+				-1.7
3,918,893	+				+0.5
3,918,893	+				+0.5
3,918,894	-				-0.3
3,918,894	-				-0.4
3,918,894	-				+1.5
3,918,894	-				-0.7
3,918,894	-				+0.8
3,918,894	-				+0.2
3,918,894	-				-1.4
3,918,894	-				+0.1
3,918,894	-				-0.7
3,918,894	-				+0.5
3,918,894	-				-0.8
3,918,894	-				-1.2
3,918,894	-				+1.1
3,918,894	-				+0.7
3,918,894	-				+0.5
3,918,894	-				-1.9
3,918,894	-				-1.3
3,918,894	-				+0.1
3,918,894	-				-0.5
3,918,894	-				+0.9
3,918,894	-				-0.7
3,918,894	-				+0.1
3,918,894	-				-0.4
3,918,894	-				+2.3
3,918,894	-				+1.5
3,918,894	-				-0.0
3,918,894	-				+1.3
3,918,894	-				-0.7
3,918,894	-				+0.3
3,918,894	-				+0.8
3,918,894	-				+0.4
3,918,894	-				-1.3
3,918,894	-				-1.0
3,918,894	-				-0.3
3,918,894	-				-0.7
3,918,894	-				+1.9
3,918,894	-				-0.3
3,918,894	-				-0.8
3,918,894	-				+1.2
3,918,894	-				+0.1
3,918,894	-				+1.1
3,918,894	-				-0.2
3,918,894	-				-0.0
3,918,894	-				-1.0
3,919,154	+		LRK54_RS17955	0.42	-2.2
3,919,154	+		LRK54_RS17955	0.42	-0.3
3,919,154	+		LRK54_RS17955	0.42	-1.5
3,919,154	+		LRK54_RS17955	0.42	-0.2
3,919,154	+		LRK54_RS17955	0.42	+0.1
3,919,154	+		LRK54_RS17955	0.42	+1.4
3,919,154	+		LRK54_RS17955	0.42	+2.2
3,919,154	+		LRK54_RS17955	0.42	-0.0
3,919,154	+		LRK54_RS17955	0.42	-1.2
3,919,154	+		LRK54_RS17955	0.42	+0.9
3,919,154	+		LRK54_RS17955	0.42	-0.6
3,919,154	+		LRK54_RS17955	0.42	+0.2
3,919,154	+		LRK54_RS17955	0.42	-2.4
3,919,154	+		LRK54_RS17955	0.42	-1.8
3,919,154	+		LRK54_RS17955	0.42	-1.3
3,919,154	+		LRK54_RS17955	0.42	+0.0
3,919,154	+		LRK54_RS17955	0.42	+0.3
3,919,154	+		LRK54_RS17955	0.42	-0.3
3,919,154	+		LRK54_RS17955	0.42	-0.8
3,919,154	+		LRK54_RS17955	0.42	+0.9
3,919,154	+		LRK54_RS17955	0.42	+0.1
3,919,154	+		LRK54_RS17955	0.42	+0.8
3,919,154	+		LRK54_RS17955	0.42	-0.1
3,919,154	+		LRK54_RS17955	0.42	-2.2
3,919,154	+		LRK54_RS17955	0.42	+1.1
3,919,154	+		LRK54_RS17955	0.42	+0.3
3,919,154	+		LRK54_RS17955	0.42	-0.5
3,919,154	+		LRK54_RS17955	0.42	-0.8
3,919,154	+		LRK54_RS17955	0.42	+1.1
3,919,154	+		LRK54_RS17955	0.42	-0.7
3,919,154	+		LRK54_RS17955	0.42	-0.7
3,919,154	+		LRK54_RS17955	0.42	+0.0
3,919,154	+		LRK54_RS17955	0.42	-0.0
3,919,154	+		LRK54_RS17955	0.42	+3.1
3,919,154	+		LRK54_RS17955	0.42	+0.1
3,919,154	+		LRK54_RS17955	0.42	+2.1
3,919,154	+		LRK54_RS17955	0.42	+1.1
3,919,154	+		LRK54_RS17955	0.42	-1.2
3,919,154	+		LRK54_RS17955	0.42	+0.1
3,919,154	+		LRK54_RS17955	0.42	+1.0
3,919,154	+		LRK54_RS17955	0.42	-1.0
3,919,154	+		LRK54_RS17955	0.42	-1.1
3,919,154	+		LRK54_RS17955	0.42	-1.7
3,919,154	+		LRK54_RS17955	0.42	-1.1
3,919,154	+		LRK54_RS17955	0.42	+0.7
3,919,154	+		LRK54_RS17955	0.42	-1.4
3,919,154	+		LRK54_RS17955	0.42	+0.5
3,919,154	+		LRK54_RS17955	0.42	-0.0
3,919,154	+		LRK54_RS17955	0.42	+0.4
3,919,154	+		LRK54_RS17955	0.42	-1.8
3,919,154	+		LRK54_RS17955	0.42	-1.6
3,919,154	+		LRK54_RS17955	0.42	+0.8
3,919,154	+		LRK54_RS17955	0.42	+0.7
3,919,154	+		LRK54_RS17955	0.42	-0.0
3,919,154	+		LRK54_RS17955	0.42	-1.3
3,919,154	+		LRK54_RS17955	0.42	+0.3
3,919,154	+		LRK54_RS17955	0.42	+1.5
3,919,154	+		LRK54_RS17955	0.42	-1.1
3,919,154	+		LRK54_RS17955	0.42	-0.4
3,919,154	+		LRK54_RS17955	0.42	+2.1
3,919,154	+		LRK54_RS17955	0.42	-0.5
3,919,154	+		LRK54_RS17955	0.42	+1.0
3,919,154	+		LRK54_RS17955	0.42	+0.0
3,919,154	+		LRK54_RS17955	0.42	-0.5
3,919,154	+		LRK54_RS17955	0.42	-0.8
3,919,154	+		LRK54_RS17955	0.42	-1.2
3,919,154	+		LRK54_RS17955	0.42	-1.8
3,919,154	+		LRK54_RS17955	0.42	-1.3
3,919,154	+		LRK54_RS17955	0.42	-1.6
3,919,154	+		LRK54_RS17955	0.42	+1.3
3,919,154	+		LRK54_RS17955	0.42	+0.8
3,919,155	-		LRK54_RS17955	0.42	+0.2
3,919,155	-		LRK54_RS17955	0.42	-0.5
3,919,155	-		LRK54_RS17955	0.42	-0.8
3,919,155	-		LRK54_RS17955	0.42	-0.3
3,919,155	-		LRK54_RS17955	0.42	-0.2
3,919,155	-		LRK54_RS17955	0.42	+1.7
3,919,155	-		LRK54_RS17955	0.42	-0.7
3,919,155	-		LRK54_RS17955	0.42	-1.6
3,919,155	-		LRK54_RS17955	0.42	-0.5
3,919,155	-		LRK54_RS17955	0.42	-0.9
3,919,155	-		LRK54_RS17955	0.42	+0.8
3,919,155	-		LRK54_RS17955	0.42	-2.6
3,919,155	-		LRK54_RS17955	0.42	+2.9
3,919,155	-		LRK54_RS17955	0.42	-0.6
3,919,155	-		LRK54_RS17955	0.42	-0.5
3,919,155	-		LRK54_RS17955	0.42	-1.8
3,919,155	-		LRK54_RS17955	0.42	-0.8
3,919,155	-		LRK54_RS17955	0.42	+0.8
3,919,155	-		LRK54_RS17955	0.42	+1.2
3,919,155	-		LRK54_RS17955	0.42	-0.9
3,919,155	-		LRK54_RS17955	0.42	+1.1
3,919,155	-		LRK54_RS17955	0.42	-0.3
3,919,155	-		LRK54_RS17955	0.42	+2.6
3,919,155	-		LRK54_RS17955	0.42	+2.5
3,919,155	-		LRK54_RS17955	0.42	-0.2
3,919,155	-		LRK54_RS17955	0.42	-0.3
3,919,155	-		LRK54_RS17955	0.42	+2.1
3,919,155	-		LRK54_RS17955	0.42	+1.1
3,919,155	-		LRK54_RS17955	0.42	+0.4
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3,921,763	+		LRK54_RS17965	0.40	+0.8
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