Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS17660

Experiment: R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM
3,860,185	+		LRK54_RS17650	0.34	-1.1
3,860,185	+		LRK54_RS17650	0.34	-1.0
3,860,186	-		LRK54_RS17650	0.34	-2.0
3,860,365	+		LRK54_RS17650	0.68	-1.3
3,860,365	+		LRK54_RS17650	0.68	-2.1
3,860,366	-		LRK54_RS17650	0.68	-1.1
3,860,366	-		LRK54_RS17650	0.68	-2.2
3,860,371	+		LRK54_RS17650	0.69	-0.4
3,860,371	+		LRK54_RS17650	0.69	+0.3
3,860,371	+		LRK54_RS17650	0.69	+1.1
3,860,372	-		LRK54_RS17650	0.69	-0.7
3,860,372	-		LRK54_RS17650	0.69	-0.1
3,860,372	-		LRK54_RS17650	0.69	-0.7
3,860,372	-		LRK54_RS17650	0.69	-0.0
3,860,446	+		LRK54_RS17650	0.83	-1.6
3,860,447	-		LRK54_RS17650	0.83	-1.1
3,860,447	-		LRK54_RS17650	0.83	-1.0
3,860,447	-		LRK54_RS17650	0.83	-1.7
3,860,490	+				+0.1
3,860,491	-				-1.3
3,860,491	-				+0.5
3,860,491	-				-1.5
3,860,520	+				-1.1
3,860,520	+				+1.1
3,860,520	+				-1.5
3,860,520	+				-1.3
3,860,521	-				-1.2
3,860,521	-				+0.5
3,860,521	-				-1.5
3,860,521	-				-0.6
3,860,521	-				-1.4
3,860,539	+				-0.5
3,860,539	+				-1.3
3,860,539	+				+0.0
3,860,540	-				-1.0
3,860,540	-				+3.1
3,860,540	-				-0.4
3,860,540	-				-1.3
3,860,540	-				-0.2
3,860,540	-				-1.8
3,860,551	+				+1.5
3,860,551	+				+0.8
3,860,552	-				+1.1
3,860,656	+		LRK54_RS17655	0.17	-1.6
3,860,656	+		LRK54_RS17655	0.17	-1.9
3,860,656	+		LRK54_RS17655	0.17	-2.6
3,860,656	+		LRK54_RS17655	0.17	+1.1
3,860,657	-		LRK54_RS17655	0.17	+0.3
3,860,908	+		LRK54_RS17655	0.58	-0.1
3,860,909	-		LRK54_RS17655	0.58	-0.8
3,860,909	-		LRK54_RS17655	0.58	-1.3
3,860,942	+		LRK54_RS17655	0.64	-1.2
3,860,942	+		LRK54_RS17655	0.64	-0.2
3,860,942	+		LRK54_RS17655	0.64	+1.5
3,860,942	+		LRK54_RS17655	0.64	-0.2
3,860,943	-		LRK54_RS17655	0.64	-0.1
3,860,943	-		LRK54_RS17655	0.64	-0.7
3,860,943	-		LRK54_RS17655	0.64	+0.0
3,860,943	-		LRK54_RS17655	0.64	+1.5
3,860,943	-		LRK54_RS17655	0.64	-1.0
3,860,943	-		LRK54_RS17655	0.64	-0.3
3,861,007	+		LRK54_RS17655	0.74	-0.0
3,861,007	+		LRK54_RS17655	0.74	-0.5
3,861,007	+		LRK54_RS17655	0.74	-0.0
3,861,007	+		LRK54_RS17655	0.74	-1.4
3,861,007	+		LRK54_RS17655	0.74	-1.4
3,861,007	+		LRK54_RS17655	0.74	-0.8
3,861,007	+		LRK54_RS17655	0.74	-0.1
3,861,007	+		LRK54_RS17655	0.74	+0.5
3,861,007	+		LRK54_RS17655	0.74	-1.4
3,861,007	+		LRK54_RS17655	0.74	+0.1
3,861,007	+		LRK54_RS17655	0.74	-0.8
3,861,007	+		LRK54_RS17655	0.74	-2.1
3,861,007	+		LRK54_RS17655	0.74	-1.9
3,861,007	+		LRK54_RS17655	0.74	-0.0
3,861,007	+		LRK54_RS17655	0.74	-1.8
3,861,007	+		LRK54_RS17655	0.74	+0.0
3,861,007	+		LRK54_RS17655	0.74	+0.2
3,861,007	+		LRK54_RS17655	0.74	+0.5
3,861,007	+		LRK54_RS17655	0.74	-0.0
3,861,007	+		LRK54_RS17655	0.74	+0.8
3,861,007	+		LRK54_RS17655	0.74	-0.2
3,861,007	+		LRK54_RS17655	0.74	-0.2
3,861,007	+		LRK54_RS17655	0.74	-2.5
3,861,007	+		LRK54_RS17655	0.74	+0.8
3,861,008	-		LRK54_RS17655	0.74	-0.1
3,861,008	-		LRK54_RS17655	0.74	+1.9
3,861,008	-		LRK54_RS17655	0.74	-1.0
3,861,008	-		LRK54_RS17655	0.74	-1.1
3,861,008	-		LRK54_RS17655	0.74	-1.0
3,861,008	-		LRK54_RS17655	0.74	+1.0
3,861,008	-		LRK54_RS17655	0.74	-0.7
3,861,008	-		LRK54_RS17655	0.74	-2.1
3,861,008	-		LRK54_RS17655	0.74	+1.6
3,861,008	-		LRK54_RS17655	0.74	-0.9
3,861,243	-		LRK54_RS17660	0.18	-1.0
3,861,243	-		LRK54_RS17660	0.18	-1.0
3,861,243	-		LRK54_RS17660	0.18	+0.7
3,861,243	-		LRK54_RS17660	0.18	-1.2
3,861,267	+		LRK54_RS17660	0.24	-0.7
3,861,377	+		LRK54_RS17660	0.49	-0.3
3,861,463	+		LRK54_RS17660	0.68	-1.2
3,861,463	+		LRK54_RS17660	0.68	-2.2
3,861,464	-		LRK54_RS17660	0.68	-0.7
3,861,532	-		LRK54_RS17660	0.84	-0.5
3,861,532	-		LRK54_RS17660	0.84	-2.4
3,861,559	-		LRK54_RS17660	0.90	-1.3
3,861,567	+				+0.1
3,861,568	-				+0.5
3,861,594	+				+0.3
3,861,594	+				-1.6
3,861,594	+				-0.3
3,861,594	+				-1.2
3,861,594	+				-0.3
3,861,594	+				-0.4
3,861,670	+				-1.0
3,861,670	+				+1.5
3,861,670	+				-0.2
3,861,670	+				-2.6
3,861,670	+				-1.0
3,861,670	+				-0.5
3,861,670	+				+0.5
3,861,670	+				-0.6
3,861,670	+				-0.0
3,861,670	+				+2.1
3,861,670	+				+1.1
3,861,671	-				-1.3
3,861,671	-				-0.9
3,861,671	-				-0.8
3,861,671	-				-1.2
3,861,671	-				-0.7
3,861,671	-				-0.2
3,861,671	-				+0.5
3,861,671	-				-1.6
3,861,671	-				+1.1
3,861,671	-				+1.1
3,861,671	-				-0.8
3,861,671	-				+0.4
3,861,671	-				+0.2
3,861,674	+				-2.0
3,861,674	+				+0.3
3,861,674	+				-3.4
3,861,674	+				+0.6
3,861,674	+				+0.5
3,861,675	-				-1.5
3,861,675	-				-0.6
3,861,675	-				-0.2
3,861,675	-				-1.3
3,861,675	-				+1.5
3,861,675	-				+2.1
3,861,675	-				-0.7
3,861,675	-				-0.4
3,861,675	-				-2.4
3,861,675	-				+1.0
3,861,675	-				+1.1
3,861,675	-				-0.6
3,861,675	-				+0.5
3,861,675	-				+1.5
3,861,675	-				-1.8
3,861,675	-				-2.3
3,861,710	+				+0.7
3,861,711	-				-2.2
3,861,711	-				-1.8
3,861,711	-				-0.9
3,861,720	+				-2.2
3,861,721	-				-0.5
3,861,721	-				-0.7
3,861,721	-				+1.5
3,861,776	+				-2.8
3,861,776	+				+0.8
3,861,776	+				-0.0
3,861,777	-				-1.1
3,861,777	-				-0.0
3,861,886	+				+1.5
3,861,991	+		LRK54_RS17665	0.29	+0.1
3,861,991	+		LRK54_RS17665	0.29	+3.7
3,861,992	-		LRK54_RS17665	0.29	-0.1
3,862,059	+		LRK54_RS17665	0.57	+0.8
3,862,059	+		LRK54_RS17665	0.57	-0.3
3,862,059	+		LRK54_RS17665	0.57	-1.9
3,862,059	+		LRK54_RS17665	0.57	-1.4
3,862,059	+		LRK54_RS17665	0.57	+0.9
3,862,059	+		LRK54_RS17665	0.57	+0.3
3,862,059	+		LRK54_RS17665	0.57	-1.9
3,862,059	+		LRK54_RS17665	0.57	-1.1
3,862,059	+		LRK54_RS17665	0.57	-2.6
3,862,059	+		LRK54_RS17665	0.57	-1.0
3,862,059	+		LRK54_RS17665	0.57	+0.8
3,862,059	+		LRK54_RS17665	0.57	+0.3
3,862,059	+		LRK54_RS17665	0.57	+0.9
3,862,059	+		LRK54_RS17665	0.57	+0.2
3,862,059	+		LRK54_RS17665	0.57	-0.2
3,862,059	+		LRK54_RS17665	0.57	-0.7
3,862,059	+		LRK54_RS17665	0.57	-2.5
3,862,059	+		LRK54_RS17665	0.57	-0.2
3,862,059	+		LRK54_RS17665	0.57	-0.2
3,862,059	+		LRK54_RS17665	0.57	-0.6
3,862,059	+		LRK54_RS17665	0.57	-0.6
3,862,059	+		LRK54_RS17665	0.57	-0.6
3,862,059	+		LRK54_RS17665	0.57	-0.0
3,862,059	+		LRK54_RS17665	0.57	+0.3
3,862,059	+		LRK54_RS17665	0.57	+0.4
3,862,059	+		LRK54_RS17665	0.57	+1.1
3,862,059	+		LRK54_RS17665	0.57	+0.4
3,862,060	-		LRK54_RS17665	0.58	-2.0
3,862,060	-		LRK54_RS17665	0.58	+0.5
3,862,060	-		LRK54_RS17665	0.58	-1.3
3,862,060	-		LRK54_RS17665	0.58	-1.2
3,862,060	-		LRK54_RS17665	0.58	-1.2
3,862,060	-		LRK54_RS17665	0.58	-1.3
3,862,060	-		LRK54_RS17665	0.58	-0.5
3,862,060	-		LRK54_RS17665	0.58	+0.1
3,862,060	-		LRK54_RS17665	0.58	+0.4
3,862,060	-		LRK54_RS17665	0.58	-0.6
3,862,060	-		LRK54_RS17665	0.58	-0.0
3,862,060	-		LRK54_RS17665	0.58	-0.9
3,862,060	-		LRK54_RS17665	0.58	+0.6
3,862,060	-		LRK54_RS17665	0.58	-1.8
3,862,060	-		LRK54_RS17665	0.58	-1.2
3,862,060	-		LRK54_RS17665	0.58	-1.1
3,862,060	-		LRK54_RS17665	0.58	+0.2
3,862,060	-		LRK54_RS17665	0.58	-1.9
3,862,060	-		LRK54_RS17665	0.58	-2.7
3,862,060	-		LRK54_RS17665	0.58	-0.3
3,862,060	-		LRK54_RS17665	0.58	-1.5
3,862,060	-		LRK54_RS17665	0.58	-0.5
3,862,060	-		LRK54_RS17665	0.58	+0.2
3,862,060	-		LRK54_RS17665	0.58	+0.5
3,862,060	-		LRK54_RS17665	0.58	-1.6
3,862,143	+				+0.0
3,862,144	-				+0.5
3,862,144	-				-0.9
3,862,144	-				-0.6
3,862,162	+				-0.1
3,862,163	-				-1.0
3,862,163	-				-0.0
3,862,238	+				-3.0
3,862,238	+				-0.9
3,862,238	+				-1.3
3,862,238	+				+1.5
3,862,238	+				-0.5
3,862,238	+				-1.0
3,862,238	+				-0.7
3,862,238	+				-1.8
3,862,238	+				+1.1
3,862,238	+				-0.2
3,862,238	+				+0.1
3,862,238	+				+1.1
3,862,238	+				-0.3
3,862,239	-				-1.0
3,862,239	-				-0.3
3,862,239	-				-0.2
3,862,239	-				-1.5
3,862,239	-				-0.2
3,862,239	-				-0.9
3,862,239	-				-0.3
3,862,239	-				-0.2
3,862,239	-				+1.8
3,862,239	-				-0.9
3,862,319	-				-0.3
3,862,319	-				-0.2
3,862,564	+				-1.1
3,862,564	+				-0.2