Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS17435

Experiment: R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM
3,810,403	+		LRK54_RS17430	0.47	+1.0
3,810,403	+		LRK54_RS17430	0.47	-0.2
3,810,405	+		LRK54_RS17430	0.47	-0.9
3,810,405	+		LRK54_RS17430	0.47	-0.8
3,810,405	+		LRK54_RS17430	0.47	+3.1
3,810,405	+		LRK54_RS17430	0.47	-1.3
3,810,405	+		LRK54_RS17430	0.47	-1.0
3,810,405	+		LRK54_RS17430	0.47	-0.0
3,810,405	+		LRK54_RS17430	0.47	-1.7
3,810,405	+		LRK54_RS17430	0.47	-1.0
3,810,405	+		LRK54_RS17430	0.47	+2.1
3,810,405	+		LRK54_RS17430	0.47	-0.1
3,810,405	+		LRK54_RS17430	0.47	-1.3
3,810,405	+		LRK54_RS17430	0.47	+0.5
3,810,405	+		LRK54_RS17430	0.47	-2.0
3,810,405	+		LRK54_RS17430	0.47	-1.6
3,810,405	+		LRK54_RS17430	0.47	+0.3
3,810,405	+		LRK54_RS17430	0.47	-1.7
3,810,405	+		LRK54_RS17430	0.47	-0.0
3,810,405	+		LRK54_RS17430	0.47	-0.0
3,810,405	+		LRK54_RS17430	0.47	-1.7
3,810,405	+		LRK54_RS17430	0.47	+0.5
3,810,405	+		LRK54_RS17430	0.47	+0.1
3,810,405	+		LRK54_RS17430	0.47	+0.3
3,810,405	+		LRK54_RS17430	0.47	-1.8
3,810,405	+		LRK54_RS17430	0.47	-2.6
3,810,405	+		LRK54_RS17430	0.47	-0.2
3,810,405	+		LRK54_RS17430	0.47	+0.4
3,810,406	-		LRK54_RS17430	0.47	+0.5
3,810,406	-		LRK54_RS17430	0.47	-0.4
3,810,406	-		LRK54_RS17430	0.47	+1.1
3,810,406	-		LRK54_RS17430	0.47	+0.8
3,810,406	-		LRK54_RS17430	0.47	-1.7
3,810,406	-		LRK54_RS17430	0.47	-0.0
3,810,406	-		LRK54_RS17430	0.47	-0.7
3,810,406	-		LRK54_RS17430	0.47	+0.8
3,810,406	-		LRK54_RS17430	0.47	-2.0
3,810,406	-		LRK54_RS17430	0.47	-1.6
3,810,406	-		LRK54_RS17430	0.47	-0.7
3,810,406	-		LRK54_RS17430	0.47	+0.9
3,810,406	-		LRK54_RS17430	0.47	+0.8
3,810,406	-		LRK54_RS17430	0.47	-1.3
3,810,406	-		LRK54_RS17430	0.47	-1.3
3,810,406	-		LRK54_RS17430	0.47	-2.1
3,810,406	-		LRK54_RS17430	0.47	+0.5
3,810,406	-		LRK54_RS17430	0.47	+1.1
3,810,406	-		LRK54_RS17430	0.47	-2.3
3,810,406	-		LRK54_RS17430	0.47	-1.0
3,810,406	-		LRK54_RS17430	0.47	-0.9
3,810,406	-		LRK54_RS17430	0.47	+3.1
3,810,406	-		LRK54_RS17430	0.47	-1.2
3,810,406	-		LRK54_RS17430	0.47	+2.1
3,810,406	-		LRK54_RS17430	0.47	-0.6
3,810,406	-		LRK54_RS17430	0.47	+0.8
3,810,406	-		LRK54_RS17430	0.47	+0.5
3,810,406	-		LRK54_RS17430	0.47	+1.0
3,810,406	-		LRK54_RS17430	0.47	-0.0
3,810,406	-		LRK54_RS17430	0.47	-2.0
3,810,438	+		LRK54_RS17430	0.49	-1.2
3,810,438	+		LRK54_RS17430	0.49	+0.2
3,810,438	+		LRK54_RS17430	0.49	+0.3
3,810,439	-		LRK54_RS17430	0.49	-1.7
3,810,439	-		LRK54_RS17430	0.49	+2.1
3,810,768	+		LRK54_RS17430	0.72	-1.8
3,810,768	+		LRK54_RS17430	0.72	-1.5
3,810,768	+		LRK54_RS17430	0.72	+1.5
3,810,768	+		LRK54_RS17430	0.72	-0.7
3,810,768	+		LRK54_RS17430	0.72	+0.2
3,810,768	+		LRK54_RS17430	0.72	+2.1
3,810,768	+		LRK54_RS17430	0.72	-2.0
3,810,769	-		LRK54_RS17430	0.72	+1.1
3,810,899	+		LRK54_RS17430	0.82	-1.9
3,810,969	+		LRK54_RS17430	0.87	+0.4
3,810,969	+		LRK54_RS17430	0.87	-0.5
3,810,969	+		LRK54_RS17430	0.87	-1.5
3,810,969	+		LRK54_RS17430	0.87	+0.3
3,810,969	+		LRK54_RS17430	0.87	-0.0
3,810,969	+		LRK54_RS17430	0.87	-1.7
3,810,969	+		LRK54_RS17430	0.87	+0.8
3,810,969	+		LRK54_RS17430	0.87	-1.0
3,810,969	+		LRK54_RS17430	0.87	-0.1
3,810,969	+		LRK54_RS17430	0.87	-1.4
3,810,969	+		LRK54_RS17430	0.87	+1.1
3,810,969	+		LRK54_RS17430	0.87	-0.3
3,810,969	+		LRK54_RS17430	0.87	-1.3
3,810,969	+		LRK54_RS17430	0.87	-0.4
3,810,969	+		LRK54_RS17430	0.87	-0.7
3,810,969	+		LRK54_RS17430	0.87	-2.2
3,810,969	+		LRK54_RS17430	0.87	+0.1
3,810,969	+		LRK54_RS17430	0.87	-1.3
3,810,969	+		LRK54_RS17430	0.87	+0.1
3,810,969	+		LRK54_RS17430	0.87	+1.5
3,810,969	+		LRK54_RS17430	0.87	+0.5
3,810,969	+		LRK54_RS17430	0.87	-0.3
3,810,969	+		LRK54_RS17430	0.87	+1.1
3,810,970	-		LRK54_RS17430	0.87	-1.6
3,810,970	-		LRK54_RS17430	0.87	-1.0
3,810,970	-		LRK54_RS17430	0.87	+1.0
3,810,970	-		LRK54_RS17430	0.87	-1.5
3,810,970	-		LRK54_RS17430	0.87	+1.5
3,810,970	-		LRK54_RS17430	0.87	-1.5
3,810,970	-		LRK54_RS17430	0.87	+1.3
3,810,970	-		LRK54_RS17430	0.87	-1.5
3,810,970	-		LRK54_RS17430	0.87	-0.0
3,810,970	-		LRK54_RS17430	0.87	+0.9
3,810,970	-		LRK54_RS17430	0.87	-2.2
3,810,970	-		LRK54_RS17430	0.87	-0.0
3,810,970	-		LRK54_RS17430	0.87	-0.8
3,810,970	-		LRK54_RS17430	0.87	+0.3
3,810,970	-		LRK54_RS17430	0.87	-0.9
3,810,970	-		LRK54_RS17430	0.87	+3.1
3,810,970	-		LRK54_RS17430	0.87	-0.9
3,810,970	-		LRK54_RS17430	0.87	-1.1
3,810,970	-		LRK54_RS17430	0.87	-1.3
3,810,970	-		LRK54_RS17430	0.87	+2.1
3,810,970	-		LRK54_RS17430	0.87	+0.5
3,810,970	-		LRK54_RS17430	0.87	-1.3
3,810,970	-		LRK54_RS17430	0.87	+0.2
3,810,970	-		LRK54_RS17430	0.87	-1.3
3,810,970	-		LRK54_RS17430	0.87	-0.3
3,810,970	-		LRK54_RS17430	0.87	-1.0
3,811,039	+				-0.9
3,811,040	-				-0.8
3,811,040	-				-1.8
3,811,046	+				-2.2
3,811,046	+				-0.6
3,811,046	+				+0.5
3,811,046	+				-2.5
3,811,046	+				+0.1
3,811,046	+				+1.5
3,811,046	+				+0.4
3,811,046	+				+0.2
3,811,046	+				-0.5
3,811,046	+				+0.5
3,811,046	+				+1.1
3,811,047	-				-1.8
3,811,047	-				+0.8
3,811,047	-				-1.0
3,811,047	-				-1.0
3,811,047	-				-1.4
3,811,047	-				-0.0
3,811,047	-				-2.5
3,811,047	-				-0.2
3,811,047	-				+1.1
3,811,047	-				-2.3
3,811,047	-				-1.4
3,811,199	-				-0.6
3,811,199	-				-0.5
3,811,222	+				-2.0
3,811,222	+				+2.1
3,811,222	+				-0.4
3,811,222	+				+0.8
3,811,222	+				-0.8
3,811,222	+				-0.0
3,811,222	+				-1.0
3,811,222	+				+0.8
3,811,222	+				-3.1
3,811,222	+				-1.1
3,811,222	+				-0.3
3,811,222	+				-2.1
3,811,222	+				+1.5
3,811,222	+				+0.8
3,811,222	+				+0.9
3,811,222	+				-1.2
3,811,222	+				-0.7
3,811,222	+				+0.7
3,811,222	+				-0.9
3,811,222	+				-0.5
3,811,222	+				-0.6
3,811,222	+				+1.1
3,811,222	+				-1.4
3,811,222	+				+0.3
3,811,222	+				+0.3
3,811,223	-				+1.5
3,811,223	-				+0.8
3,811,223	-				-0.9
3,811,223	-				-1.7
3,811,223	-				-0.5
3,811,223	-				-0.9
3,811,223	-				+1.7
3,811,223	-				+1.1
3,811,223	-				-1.4
3,811,223	-				-1.0
3,811,223	-				-0.9
3,811,223	-				-0.3
3,811,223	-				+0.9
3,811,223	-				-0.2
3,811,223	-				+0.1
3,811,223	-				+0.3
3,811,223	-				+0.5
3,811,223	-				-0.6
3,811,223	-				-0.2
3,811,223	-				+0.1
3,811,223	-				+0.8
3,811,223	-				-0.3
3,811,223	-				-0.8
3,811,223	-				+0.3
3,811,223	-				+0.5
3,811,223	-				-0.5
3,811,223	-				+0.8
3,811,255	+				-0.3
3,811,255	+				+1.3
3,811,255	+				-0.2
3,811,255	+				-0.8
3,811,256	-				+1.5
3,811,257	+				-0.1
3,811,257	+				-0.2
3,811,257	+				+1.5
3,811,257	+				+0.3
3,811,257	+				+0.4
3,811,257	+				-1.4
3,811,257	+				-0.3
3,811,257	+				-0.6
3,811,257	+				+1.5
3,811,257	+				+0.5
3,811,257	+				+2.1
3,811,257	+				+1.4
3,811,258	-				-0.9
3,811,258	-				+1.5
3,811,258	-				+2.1
3,811,258	-				-1.8
3,811,258	-				+0.5
3,811,258	-				-1.8
3,811,258	-				+3.1
3,811,258	-				-1.0
3,811,258	-				+0.0
3,811,258	-				+1.8
3,811,258	-				+1.1
3,811,258	-				+0.3
3,811,258	-				-3.1
3,811,299	+				-0.3
3,811,299	+				-1.9
3,811,299	+				-0.4
3,811,299	+				-0.8
3,811,299	+				+0.3
3,811,299	+				-1.0
3,811,299	+				-2.3
3,811,299	+				-0.5
3,811,299	+				+0.3
3,811,299	+				+0.1
3,811,299	+				-2.4
3,811,300	-				-0.0
3,811,300	-				-0.5
3,811,300	-				+2.1
3,811,300	-				-1.3
3,811,300	-				+1.6
3,811,300	-				-0.4
3,811,300	-				-1.3
3,811,300	-				-0.9
3,811,300	-				-1.5
3,811,300	-				+1.3
3,811,300	-				-0.2
3,811,300	-				-1.0
3,811,300	-				+2.1
3,811,300	-				-0.9
3,811,300	-				-1.1
3,811,300	-				+1.1
3,811,300	-				-1.5
3,811,381	+				-1.6
3,811,381	+				-1.0
3,811,623	+		LRK54_RS17435	0.56	-1.1
3,811,624	-		LRK54_RS17435	0.56	+1.5
3,811,624	-		LRK54_RS17435	0.56	-1.5
3,811,624	-		LRK54_RS17435	0.56	+0.4
3,811,624	-		LRK54_RS17435	0.56	-0.3
3,811,624	-		LRK54_RS17435	0.56	+1.5
3,811,624	-		LRK54_RS17435	0.56	+3.7
3,811,624	-		LRK54_RS17435	0.56	-1.7
3,811,767	+				-0.7
3,811,767	+				+2.1
3,811,768	-				+0.7
3,811,768	-				-1.0
3,811,826	+				-0.5
3,811,827	-				+0.8
3,811,827	-				-0.0