Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS13350

Experiment: R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM
2,993,933	+		LRK54_RS13340	0.79	-1.2
2,993,933	+		LRK54_RS13340	0.79	-0.3
2,993,933	+		LRK54_RS13340	0.79	-1.3
2,993,933	+		LRK54_RS13340	0.79	-0.7
2,993,933	+		LRK54_RS13340	0.79	-1.6
2,993,933	+		LRK54_RS13340	0.79	+0.8
2,993,933	+		LRK54_RS13340	0.79	+0.4
2,993,933	+		LRK54_RS13340	0.79	+0.2
2,993,933	+		LRK54_RS13340	0.79	-0.5
2,993,933	+		LRK54_RS13340	0.79	+1.6
2,993,933	+		LRK54_RS13340	0.79	-0.9
2,993,933	+		LRK54_RS13340	0.79	-1.6
2,993,933	+		LRK54_RS13340	0.79	-1.6
2,993,933	+		LRK54_RS13340	0.79	+1.2
2,993,933	+		LRK54_RS13340	0.79	-0.4
2,993,933	+		LRK54_RS13340	0.79	+1.6
2,993,933	+		LRK54_RS13340	0.79	+3.2
2,993,933	+		LRK54_RS13340	0.79	+0.0
2,993,933	+		LRK54_RS13340	0.79	-1.6
2,993,933	+		LRK54_RS13340	0.79	+0.8
2,993,933	+		LRK54_RS13340	0.79	+0.4
2,993,933	+		LRK54_RS13340	0.79	-0.5
2,993,934	-		LRK54_RS13340	0.80	-1.6
2,993,934	-		LRK54_RS13340	0.80	-1.1
2,993,934	-		LRK54_RS13340	0.80	+0.2
2,993,934	-		LRK54_RS13340	0.80	+0.8
2,993,934	-		LRK54_RS13340	0.80	+0.8
2,993,934	-		LRK54_RS13340	0.80	+0.2
2,993,934	-		LRK54_RS13340	0.80	-0.4
2,993,934	-		LRK54_RS13340	0.80	-0.2
2,993,934	-		LRK54_RS13340	0.80	-0.2
2,993,934	-		LRK54_RS13340	0.80	+1.2
2,993,934	-				+0.6
2,993,934	-		LRK54_RS13340	0.80	+1.6
2,994,026	+				-2.4
2,994,026	+				+2.2
2,994,027	-				+0.8
2,994,027	-				+0.6
2,994,027	-				-1.5
2,994,027	-				+1.6
2,994,045	+				-0.7
2,994,045	+				+0.0
2,994,045	+				-0.6
2,994,046	-				-0.4
2,994,046	-				-0.2
2,994,050	+				-2.4
2,994,050	+				-1.0
2,994,050	+				+0.2
2,994,050	+				+0.6
2,994,050	+				+3.2
2,994,050	+				-0.5
2,994,050	+				-1.7
2,994,050	+				-0.2
2,994,050	+				+0.7
2,994,050	+				-0.8
2,994,050	+				+1.6
2,994,051	-				+0.0
2,994,051	-				+1.2
2,994,051	-				+1.2
2,994,051	-				+1.2
2,994,550	+		LRK54_RS13345	0.84	+2.2
2,994,550	+		LRK54_RS13345	0.84	+3.0
2,994,633	+				-0.0
2,994,633	+				+1.0
2,994,633	+				-1.2
2,994,633	+				-1.2
2,994,633	+				-0.4
2,994,633	+				-1.6
2,994,633	+				-0.3
2,994,633	+				-2.5
2,994,633	+				-1.1
2,994,633	+				-1.9
2,994,633	+				+0.2
2,994,633	+				+3.2
2,994,633	+				+0.6
2,994,633	+				-2.0
2,994,633	+				-0.0
2,994,633	+				-1.0
2,994,633	+				-1.1
2,994,633	+				-2.0
2,994,633	+				-0.5
2,994,633	+				-1.4
2,994,633	+				-0.2
2,994,633	+				-2.0
2,994,633	+				+0.4
2,994,633	+				+0.2
2,994,633	+				-1.7
2,994,633	+				-1.6
2,994,633	+				-1.0
2,994,633	+				-0.6
2,994,633	+				-1.9
2,994,633	+				-0.0
2,994,633	+				-0.4
2,994,633	+				+1.6
2,994,633	+				-0.4
2,994,633	+				-2.3
2,994,633	+				-0.7
2,994,633	+				-1.3
2,994,633	+				-2.6
2,994,633	+				-3.2
2,994,633	+				+0.1
2,994,633	+				+0.4
2,994,633	+				+0.7
2,994,633	+				+2.2
2,994,634	-				-2.5
2,994,634	-				-1.8
2,994,634	-				+0.8
2,994,634	-				-3.1
2,994,634	-				-2.9
2,994,634	-				-1.0
2,994,634	-				-0.0
2,994,634	-				-0.2
2,994,634	-				-0.9
2,994,634	-				-0.4
2,994,634	-				-1.3
2,994,634	-				-0.8
2,994,634	-				-1.8
2,994,634	-				-0.5
2,994,634	-				-3.4
2,994,634	-				-1.0
2,994,634	-				+0.8
2,994,634	-				-0.5
2,994,634	-				-3.2
2,994,634	-				+0.4
2,994,634	-				-0.0
2,994,634	-				-2.2
2,994,634	-				-2.0
2,994,634	-				-1.2
2,994,634	-				+0.4
2,994,634	-				-2.5
2,994,634	-				-0.4
2,994,634	-				-0.6
2,994,634	-				+1.6
2,994,634	-				-0.6
2,994,634	-				-1.5
2,994,634	-				-2.4
2,994,634	-				-0.3
2,994,634	-				-1.6
2,994,634	-				-2.2
2,994,634	-				+0.4
2,994,784	+		LRK54_RS13350	0.31	-2.4
2,994,784	+		LRK54_RS13350	0.31	-2.4
2,994,784	+		LRK54_RS13350	0.31	-3.2
2,994,784	+		LRK54_RS13350	0.31	-2.8
2,994,785	-		LRK54_RS13350	0.31	-0.7
2,994,785	-		LRK54_RS13350	0.31	-0.3
2,994,785	-		LRK54_RS13350	0.31	+0.6
2,994,785	-		LRK54_RS13350	0.31	+0.6
2,994,785	-		LRK54_RS13350	0.31	-0.9
2,994,785	-		LRK54_RS13350	0.31	+0.6
2,994,785	-		LRK54_RS13350	0.31	-2.5
2,994,844	+		LRK54_RS13350	0.43	-3.2
2,994,844	+		LRK54_RS13350	0.43	-2.1
2,994,844	+		LRK54_RS13350	0.43	+2.2
2,994,844	+		LRK54_RS13350	0.43	-1.2
2,994,845	-		LRK54_RS13350	0.43	-0.2
2,994,845	-		LRK54_RS13350	0.43	-1.8
2,994,845	-		LRK54_RS13350	0.43	-0.2
2,994,845	-		LRK54_RS13350	0.43	-0.3
2,994,845	-		LRK54_RS13350	0.43	+1.6
2,995,316	+		LRK54_RS13355	0.34	+0.4
2,995,316	+		LRK54_RS13355	0.34	-2.0
2,995,316	+		LRK54_RS13355	0.34	+0.2
2,995,316	+		LRK54_RS13355	0.34	+1.6
2,995,316	+		LRK54_RS13355	0.34	-0.3
2,995,316	+		LRK54_RS13355	0.34	+0.8
2,995,316	+		LRK54_RS13355	0.34	+0.8
2,995,316	+		LRK54_RS13355	0.34	+1.5
2,995,317	-		LRK54_RS13355	0.35	+0.0
2,995,317	-		LRK54_RS13355	0.35	-0.2
2,995,317	-		LRK54_RS13355	0.35	-1.1
2,995,317	-		LRK54_RS13355	0.35	+1.2
2,995,317	-		LRK54_RS13355	0.35	+0.8
2,995,317	-		LRK54_RS13355	0.35	-1.5
2,995,317	-		LRK54_RS13355	0.35	+2.2
2,995,317	-		LRK54_RS13355	0.35	+2.8
2,995,317	-		LRK54_RS13355	0.35	-0.2
2,995,317	-		LRK54_RS13355	0.35	+1.2
2,995,317	-		LRK54_RS13355	0.35	-0.2
2,995,317	-		LRK54_RS13355	0.35	+0.1
2,995,317	-		LRK54_RS13355	0.35	+0.5
2,995,317	-		LRK54_RS13355	0.35	+1.2
2,995,317	-		LRK54_RS13355	0.35	+1.6
2,995,317	-		LRK54_RS13355	0.35	+0.6
2,995,317	-		LRK54_RS13355	0.35	+0.6
2,995,317	-		LRK54_RS13355	0.35	+0.2
2,995,451	+		LRK54_RS13355	0.86	-1.5
2,995,451	+		LRK54_RS13355	0.86	-3.1
2,995,451	+		LRK54_RS13355	0.86	+1.4
2,995,451	+		LRK54_RS13355	0.86	-1.6
2,995,451	+		LRK54_RS13355	0.86	-2.0
2,995,451	+		LRK54_RS13355	0.86	-0.9
2,995,452	-		LRK54_RS13355	0.87	-0.2
2,995,452	-		LRK54_RS13355	0.87	+0.0
2,995,452	-		LRK54_RS13355	0.87	+0.2
2,995,452	-		LRK54_RS13355	0.87	+1.2
2,995,852	+		LRK54_RS13360	0.21	+0.2
2,995,852	+		LRK54_RS13360	0.21	-1.6
2,995,852	+		LRK54_RS13360	0.21	-1.1
2,995,852	+		LRK54_RS13360	0.21	-2.1
2,995,852	+		LRK54_RS13360	0.21	-0.5
2,995,852	+		LRK54_RS13360	0.21	+1.6
2,995,852	+		LRK54_RS13360	0.21	+1.2
2,995,852	+		LRK54_RS13360	0.21	+0.2
2,995,852	+		LRK54_RS13360	0.21	-0.3
2,995,852	+		LRK54_RS13360	0.21	+0.0
2,995,852	+		LRK54_RS13360	0.21	-0.2
2,995,852	+		LRK54_RS13360	0.21	-0.8
2,995,852	+		LRK54_RS13360	0.21	-0.4
2,995,852	+		LRK54_RS13360	0.21	-0.5
2,995,852	+		LRK54_RS13360	0.21	-1.2
2,995,852	+		LRK54_RS13360	0.21	-1.9
2,995,852	+		LRK54_RS13360	0.21	-0.4
2,995,852	+		LRK54_RS13360	0.21	+2.4
2,995,852	+		LRK54_RS13360	0.21	-1.5
2,995,853	-		LRK54_RS13360	0.21	-0.9
2,995,853	-		LRK54_RS13360	0.21	+1.9
2,995,853	-		LRK54_RS13360	0.21	+0.0
2,995,853	-		LRK54_RS13360	0.21	-1.2
2,995,853	-		LRK54_RS13360	0.21	-1.7
2,995,853	-		LRK54_RS13360	0.21	-1.5
2,995,853	-		LRK54_RS13360	0.21	-1.7
2,995,853	-		LRK54_RS13360	0.21	+1.0
2,995,853	-		LRK54_RS13360	0.21	+0.6
2,995,853	-		LRK54_RS13360	0.21	+0.9
2,995,853	-		LRK54_RS13360	0.21	+1.4
2,996,098	+		LRK54_RS13360	0.36	+1.2
2,996,098	+		LRK54_RS13360	0.36	-0.4
2,996,098	+		LRK54_RS13360	0.36	-0.2
2,996,098	+		LRK54_RS13360	0.36	-2.2
2,996,098	+		LRK54_RS13360	0.36	-1.5
2,996,098	+		LRK54_RS13360	0.36	+1.6
2,996,098	+		LRK54_RS13360	0.36	-1.3
2,996,098	+		LRK54_RS13360	0.36	+0.0
2,996,098	+		LRK54_RS13360	0.36	-1.4
2,996,098	+		LRK54_RS13360	0.36	+0.4
2,996,098	+		LRK54_RS13360	0.36	-0.6
2,996,098	+		LRK54_RS13360	0.36	+1.9
2,996,098	+		LRK54_RS13360	0.36	-1.4
2,996,099	-		LRK54_RS13360	0.36	-0.8
2,996,099	-		LRK54_RS13360	0.36	-0.7
2,996,099	-		LRK54_RS13360	0.36	-0.8
2,996,099	-		LRK54_RS13360	0.36	-1.0
2,996,099	-		LRK54_RS13360	0.36	+0.0
2,996,099	-		LRK54_RS13360	0.36	-1.6
2,996,099	-		LRK54_RS13360	0.36	+1.1
2,996,099	-		LRK54_RS13360	0.36	-2.4
2,996,099	-		LRK54_RS13360	0.36	-0.9
2,996,099	-		LRK54_RS13360	0.36	-0.2
2,996,099	-		LRK54_RS13360	0.36	-0.2
2,996,099	-		LRK54_RS13360	0.36	-0.7
2,996,099	-		LRK54_RS13360	0.36	-3.5
2,996,099	-		LRK54_RS13360	0.36	-1.4
2,996,099	-		LRK54_RS13360	0.36	-1.3
2,996,099	-		LRK54_RS13360	0.36	+0.0