Experiment: R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK54_RS10905 and LRK54_RS10910 are separated by 218 nucleotides LRK54_RS10910 and LRK54_RS10915 are separated by 187 nucleotides LRK54_RS10915 and LRK54_RS10920 are separated by 382 nucleotides
LRK54_RS10905: LRK54_RS10905 - glutamate--cysteine ligase, at 2,411,895 to 2,413,262
_RS10905
LRK54_RS10910: LRK54_RS10910 - transcription termination factor Rho, at 2,413,481 to 2,415,280
_RS10910
LRK54_RS10915: LRK54_RS10915 - thioredoxin TrxA, at 2,415,468 to 2,415,794
_RS10915
LRK54_RS10920: LRK54_RS10920 - DEAD/DEAH box helicase, at 2,416,177 to 2,417,925
_RS10920
Position (kb)
2413
2414
2415
2416 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5
6
7
8
9 at 2413.292 kb on + strand at 2413.292 kb on + strand at 2413.293 kb on - strand at 2413.293 kb on - strand at 2413.293 kb on - strand at 2413.293 kb on - strand at 2413.293 kb on - strand at 2413.293 kb on - strand at 2415.380 kb on + strand at 2415.380 kb on + strand at 2415.380 kb on + strand at 2415.380 kb on + strand at 2415.380 kb on + strand at 2415.381 kb on - strand at 2415.381 kb on - strand at 2415.381 kb on - strand at 2415.381 kb on - strand at 2415.381 kb on - strand at 2415.381 kb on - strand at 2415.381 kb on - strand at 2415.381 kb on - strand at 2415.381 kb on - strand at 2415.381 kb on - strand at 2415.381 kb on - strand at 2415.381 kb on - strand at 2415.381 kb on - strand at 2415.381 kb on - strand at 2415.381 kb on - strand at 2415.402 kb on + strand at 2415.402 kb on + strand at 2415.402 kb on + strand at 2415.403 kb on - strand at 2415.403 kb on - strand at 2415.403 kb on - strand at 2415.403 kb on - strand at 2415.897 kb on + strand at 2415.897 kb on + strand at 2415.897 kb on + strand at 2415.897 kb on + strand at 2415.897 kb on + strand at 2415.898 kb on - strand at 2415.898 kb on - strand at 2415.898 kb on - strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.176 kb on + strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.177 kb on - strand at 2416.190 kb on + strand at 2416.190 kb on + strand at 2416.190 kb on + strand at 2416.190 kb on + strand at 2416.190 kb on + strand at 2416.190 kb on + strand at 2416.190 kb on + strand at 2416.190 kb on + strand at 2416.190 kb on + strand at 2416.190 kb on + strand at 2416.190 kb on + strand at 2416.190 kb on + strand at 2416.190 kb on + strand at 2416.190 kb on + strand at 2416.191 kb on - strand at 2416.191 kb on - strand at 2416.191 kb on - strand at 2416.191 kb on - strand at 2416.191 kb on - strand at 2416.191 kb on - strand at 2416.191 kb on - strand at 2416.191 kb on - strand at 2416.191 kb on - strand at 2416.191 kb on - strand at 2416.191 kb on - strand at 2416.191 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM remove 2,413,292 + -0.4 2,413,292 + +1.6 2,413,293 - +0.3 2,413,293 - -0.0 2,413,293 - +0.3 2,413,293 - +0.9 2,413,293 - +2.3 2,413,293 - +0.2 2,415,380 + +1.2 2,415,380 + +0.6 2,415,380 + +1.6 2,415,380 + +1.2 2,415,380 + +1.6 2,415,381 - -1.1 2,415,381 - -0.5 2,415,381 - -0.8 2,415,381 - +1.2 2,415,381 - -1.3 2,415,381 - -0.6 2,415,381 - -2.0 2,415,381 - -1.9 2,415,381 - -1.0 2,415,381 - -2.3 2,415,381 - +0.3 2,415,381 - +1.2 2,415,381 - -0.6 2,415,381 - -0.6 2,415,381 - -1.5 2,415,402 + +0.8 2,415,402 + -0.8 2,415,402 + +1.6 2,415,403 - -0.6 2,415,403 - -0.9 2,415,403 - +0.4 2,415,403 - -1.3 2,415,897 + +2.2 2,415,897 + -1.4 2,415,897 + -2.6 2,415,897 + -0.9 2,415,897 + -0.2 2,415,898 - -0.0 2,415,898 - +9.6 2,415,898 - +1.8 2,416,176 + +3.2 2,416,176 + +2.2 2,416,176 + +0.2 2,416,176 + -0.8 2,416,176 + -0.3 2,416,176 + +1.3 2,416,176 + +0.4 2,416,176 + +0.5 2,416,176 + -0.9 2,416,176 + -0.9 2,416,176 + +0.2 2,416,176 + -0.0 2,416,176 + +0.5 2,416,176 + +1.2 2,416,176 + -2.2 2,416,176 + -0.4 2,416,176 + +2.2 2,416,176 + -0.7 2,416,176 + -0.7 2,416,176 + -1.3 2,416,176 + -1.6 2,416,176 + -1.2 2,416,176 + -0.2 2,416,176 + +0.3 2,416,176 + -3.0 2,416,176 + +1.2 2,416,176 + -0.3 2,416,176 + +0.3 2,416,176 + -0.8 2,416,176 + +0.6 2,416,176 + -0.4 2,416,176 + -0.2 2,416,176 + -0.3 2,416,176 + -1.5 2,416,176 + -2.2 2,416,176 + +0.8 2,416,176 + +0.1 2,416,176 + -1.4 2,416,176 + +1.2 2,416,176 + +0.8 2,416,176 + +0.6 2,416,176 + +1.3 2,416,177 - +0.2 2,416,177 - +4.2 2,416,177 - -1.8 2,416,177 - -2.1 2,416,177 - -1.2 2,416,177 - -2.0 2,416,177 - -1.7 2,416,177 - +2.2 2,416,177 - -0.9 2,416,177 - +0.4 2,416,177 - -0.9 2,416,177 - -2.3 2,416,177 - +0.6 2,416,177 - -3.3 2,416,177 - -0.8 2,416,177 - +0.2 2,416,177 - -1.5 2,416,177 - +0.3 2,416,177 - +0.3 2,416,177 - -0.8 2,416,177 - +0.3 2,416,177 - +1.3 2,416,177 - -1.5 2,416,177 - -0.2 2,416,177 - -0.2 2,416,177 - +0.6 2,416,177 - +1.8 2,416,177 - +1.2 2,416,177 - -0.6 2,416,177 - -2.5 2,416,177 - +0.3 2,416,177 - -0.9 2,416,177 - +1.3 2,416,177 - +0.6 2,416,177 - -1.6 2,416,177 - -0.5 2,416,177 - +0.9 2,416,190 + +1.6 2,416,190 + -1.3 2,416,190 + -0.7 2,416,190 + -0.8 2,416,190 + -2.1 2,416,190 + +0.5 2,416,190 + -1.8 2,416,190 + +3.2 2,416,190 + -0.6 2,416,190 + -0.5 2,416,190 + -2.1 2,416,190 + +1.4 2,416,190 + +0.2 2,416,190 + -0.3 2,416,191 - -2.2 2,416,191 - +0.8 2,416,191 - +0.3 2,416,191 - +0.3 2,416,191 - +0.6 2,416,191 - -1.7 2,416,191 - -0.4 2,416,191 - -2.4 2,416,191 - -1.3 2,416,191 - -0.4 2,416,191 - -0.8 2,416,191 - -0.3
Or see this region's nucleotide sequence